Difference between revisions of "TSS:Mm 100285.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000177241.1:0 ENSMUST00000120928.1:0 AK157343:0 AJ002307:0 AF364049:-1 BC004829:-4 ENSMUST00000177131.7:-5 AF151985:-7 ENSMUST00000175737.1:9 A...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENSMUST00000177241.1:0 ENSMUST00000120928.1:0 AK157343:0 AJ002307:0 AF364049:-1 BC004829:-4 ENSMUST00000177131.7:-5 AF151985:-7 ENSMUST00000175737.1:9 AK089424:-18 AK170681:-19 ENSMUST00000026649.13:-20 ENSMUST00000132298.1:-20 AK150234:-20 AK004030:-20 NM_009304:-21 uc007mnw.2:-21 uc007mnx.2:-21 uc007mny.2:-21 AK185198:37 | |all_trans=ENSMUST00000177241.1:0 ENSMUST00000120928.1:0 AK157343:0 AJ002307:0 AF364049:-1 BC004829:-4 ENSMUST00000177131.7:-5 AF151985:-7 ENSMUST00000175737.1:9 AK089424:-18 AK170681:-19 ENSMUST00000026649.13:-20 ENSMUST00000132298.1:-20 AK150234:-20 AK004030:-20 NM_009304:-21 uc007mnw.2:-21 uc007mnx.2:-21 uc007mny.2:-21 AK185198:37 | ||
| + | |cellugyrin= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=28 | |distance_to_tss=28 | ||
|end=117809703 | |end=117809703 | ||
| + | |end_of_center_position=117809696 | ||
|entrez_id=20973 | |entrez_id=20973 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=Clast2 | + | |gene_alias=Clast2 |
|gene_description=synaptogyrin 2 | |gene_description=synaptogyrin 2 | ||
|gene_id=20973 | |gene_id=20973 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=117809687 | |start=117809687 | ||
| + | |start_of_center_position=117809695 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000177241.1 ENSMUST00000120928.1 AK157343 AJ002307 | |transcript_name=ENSMUST00000177241.1 ENSMUST00000120928.1 AK157343 AJ002307 | ||
Revision as of 12:38, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 117809695 |
|---|---|
| End of the center position in the TSS region: | 117809696 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000177241.1 ENSMUST00000120928.1 AK157343 AJ002307 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENSMUST00000177241.1:0 ENSMUST00000120928.1:0 AK157343:0 AJ002307:0 AF364049:-1 BC004829:-4 ENSMUST00000177131.7:-5 AF151985:-7 ENSMUST00000175737.1:9 AK089424:-18 AK170681:-19 ENSMUST00000026649.13:-20 ENSMUST00000132298.1:-20 AK150234:-20 AK004030:-20 NM_009304:-21 uc007mnw.2:-21 uc007mnx.2:-21 uc007mny.2:-21 AK185198:37 |
TATA-Box annotation
| Distance to TSS: | 28 |
|---|---|
| Nearest PromoterID: | NM_009304 |
| Entrez ID: | 20973 |
| Nearest Unigene: | Mm.468228 |
| Nearest Refseq: | NM_009304 |
| Nearest Ensembl: | ENSMUSG00000048277 |
| Gene Name: | synaptogyrin 2 |
| Gene Alias: | Clast2 |
| Gene Description: | synaptogyrin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
