Difference between revisions of "TSS:Mm 100298.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000131268.1:6 ENSMUST00000148016.7:-10 uc007moc.1:-10 AK018563:-10 ENSMUST00000139945.7:-136 |chr=chr11 |cpg_percent=0.045 |distance=6 |distanc...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Tk-1= | ||
| + | |Tk1a= | ||
| + | |Tk1b= | ||
|all_trans=ENSMUST00000131268.1:6 ENSMUST00000148016.7:-10 uc007moc.1:-10 AK018563:-10 ENSMUST00000139945.7:-136 | |all_trans=ENSMUST00000131268.1:6 ENSMUST00000148016.7:-10 uc007moc.1:-10 AK018563:-10 ENSMUST00000139945.7:-136 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-6239 | |distance_to_tss=-6239 | ||
|end=117832267 | |end=117832267 | ||
| + | |end_of_center_position=117832254 | ||
|entrez_id=21877 | |entrez_id=21877 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=D530002A18Rik | + | |gene_alias=D530002A18Rik |
|gene_description=thymidine kinase 1 | |gene_description=thymidine kinase 1 | ||
|gene_id=71562 | |gene_id=71562 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=117832239 | |start=117832239 | ||
| + | |start_of_center_position=117832253 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000131268.1 | |transcript_name=ENSMUST00000131268.1 | ||
Revision as of 12:39, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 117832253 |
|---|---|
| End of the center position in the TSS region: | 117832254 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000131268.1 |
|---|---|
| Distance: | 6 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000131268.1:6 ENSMUST00000148016.7:-10 uc007moc.1:-10 AK018563:-10 ENSMUST00000139945.7:-136 |
TATA-Box annotation
| Distance to TSS: | -6239 |
|---|---|
| Nearest PromoterID: | NM_009387 |
| Entrez ID: | 21877 |
| Nearest Unigene: | Mm.2661 |
| Nearest Refseq: | NM_009387 |
| Nearest Ensembl: | ENSMUSG00000025574 |
| Gene Name: | arylformamidase |
| Gene Alias: | D530002A18Rik |
| Gene Description: | thymidine kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
