Difference between revisions of "TSS:Mm 100314.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK153001:-4 ENSMUST00000017859.9:-16 AK163967:-16 AK053905:-29 AK046174:-35 NM_133757:-44 uc007moj.1:-44 uc007mok.1:-44 uc007mol.1:-44 AK049359:-44 BC15...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |4933424M23Rik= | ||
| + | |SAF= | ||
|all_trans=AK153001:-4 ENSMUST00000017859.9:-16 AK163967:-16 AK053905:-29 AK046174:-35 NM_133757:-44 uc007moj.1:-44 uc007mok.1:-44 uc007mol.1:-44 AK049359:-44 BC151089:-144 BC151185:-144 | |all_trans=AK153001:-4 ENSMUST00000017859.9:-16 AK163967:-16 AK053905:-29 AK046174:-35 NM_133757:-44 uc007moj.1:-44 uc007mok.1:-44 uc007mol.1:-44 AK049359:-44 BC151089:-144 BC151185:-144 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=51 | |distance_to_tss=51 | ||
|end=117986916 | |end=117986916 | ||
| + | |end_of_center_position=117986909 | ||
|entrez_id=74451 | |entrez_id=74451 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=2610019F11Rik | + | |gene_alias=2610019F11Rik |
|gene_description=phosphatidylglycerophosphate synthase 1 | |gene_description=phosphatidylglycerophosphate synthase 1 | ||
|gene_id=74451 | |gene_id=74451 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=117986900 | |start=117986900 | ||
| + | |start_of_center_position=117986908 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK153001 | |transcript_name=AK153001 | ||
Revision as of 12:42, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 117986908 |
|---|---|
| End of the center position in the TSS region: | 117986909 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK153001 |
|---|---|
| Distance: | -4 |
| Num_trans: | 12 |
| All_trans: | AK153001:-4 ENSMUST00000017859.9:-16 AK163967:-16 AK053905:-29 AK046174:-35 NM_133757:-44 uc007moj.1:-44 uc007mok.1:-44 uc007mol.1:-44 AK049359:-44 BC151089:-144 BC151185:-144 |
TATA-Box annotation
| Distance to TSS: | 51 |
|---|---|
| Nearest PromoterID: | NM_133757 |
| Entrez ID: | 74451 |
| Nearest Unigene: | Mm.28864 |
| Nearest Refseq: | NM_133757 |
| Nearest Ensembl: | ENSMUSG00000017715 |
| Gene Name: | phosphatidylglycerophosphate synthase 1 |
| Gene Alias: | 2610019F11Rik |
| Gene Description: | phosphatidylglycerophosphate synthase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
