Difference between revisions of "TSS:Mm 100319.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC022918:-15 AK185894:-133 |chr=chr11 |cpg_percent=0.02 |distance=-15 |distance_to_tss=1250 |end=118003522 |entrez_id=102466768 |gc_percent=0.572139 |ge...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=1250 | |distance_to_tss=1250 | ||
|end=118003522 | |end=118003522 | ||
| + | |end_of_center_position=118003521 | ||
|entrez_id=102466768 | |entrez_id=102466768 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias=Gm27856 | + | |gene_alias=Gm27856 |
|gene_description=microRNA 6933 | |gene_description=microRNA 6933 | ||
|gene_id=74451 | |gene_id=74451 | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=MGI:1921701 | |hgnc_mgi_id=MGI:1921701 | ||
| + | |mmu-mir-6933= | ||
|nearest_ensembl=ENSMUSG00000098958 | |nearest_ensembl=ENSMUSG00000098958 | ||
|nearest_promoter_id=NR_105898 | |nearest_promoter_id=NR_105898 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=118003518 | |start=118003518 | ||
| + | |start_of_center_position=118003520 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC022918 | |transcript_name=BC022918 | ||
Revision as of 12:42, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 118003520 |
|---|---|
| End of the center position in the TSS region: | 118003521 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC022918 |
|---|---|
| Distance: | -15 |
| Num_trans: | 2 |
| All_trans: | BC022918:-15 AK185894:-133 |
TATA-Box annotation
| Distance to TSS: | 1250 |
|---|---|
| Nearest PromoterID: | NR_105898 |
| Entrez ID: | 102466768 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_105898 |
| Nearest Ensembl: | ENSMUSG00000098958 |
| Gene Name: | phosphatidylglycerophosphate synthase 1 |
| Gene Alias: | Gm27856 |
| Gene Description: | microRNA 6933 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
