Difference between revisions of "TSS:Mm 100325.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.025 |distance= |distance_to_tss=-16863 |end=118146091 |entrez_id=69926 |gc_percent=0.542289 |gene_alias=2810003K23Rik|Dnahc17|Dnahcl1|Gm1...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |Dnahc17= | ||
| + | |Dnahcl1= | ||
| + | |Gm1178= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 5: | Line 8: | ||
|distance_to_tss=-16863 | |distance_to_tss=-16863 | ||
|end=118146091 | |end=118146091 | ||
| + | |end_of_center_position=118146083 | ||
|entrez_id=69926 | |entrez_id=69926 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=2810003K23Rik | + | |gene_alias=2810003K23Rik |
|gene_description="dynein, axonemal, heavy chain 17" | |gene_description="dynein, axonemal, heavy chain 17" | ||
|gene_name=Dnah17 | |gene_name=Dnah17 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |mKIAA3028= | ||
|nearest_ensembl=ENSMUSG00000033987 | |nearest_ensembl=ENSMUSG00000033987 | ||
|nearest_promoter_id=NM_001167746 | |nearest_promoter_id=NM_001167746 | ||
| Line 18: | Line 23: | ||
|species=mouse | |species=mouse | ||
|start=118146073 | |start=118146073 | ||
| + | |start_of_center_position=118146082 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Revision as of 12:43, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 118146082 |
|---|---|
| End of the center position in the TSS region: | 118146083 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -16863 |
|---|---|
| Nearest PromoterID: | NM_001167746 |
| Entrez ID: | 69926 |
| Nearest Unigene: | Mm.473893 |
| Nearest Refseq: | NM_001167746 |
| Nearest Ensembl: | ENSMUSG00000033987 |
| Gene Name: | Dnah17 |
| Gene Alias: | 2810003K23Rik |
| Gene Description: | "dynein, axonemal, heavy chain 17" |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
