Difference between revisions of "TSS:Mm 100354.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |CTRP1= | ||
| + | |Zsig37= | ||
|all_trans=BC049894:-2 ENSMUST00000017590.8:-19 AK005484:-19 NM_001204129:-61 uc007mpg.2:-61 ENSMUST00000124861.1:-315 | |all_trans=BC049894:-2 ENSMUST00000017590.8:-19 AK005484:-19 NM_001204129:-61 uc007mpg.2:-61 ENSMUST00000124861.1:-315 | ||
|chr=chr11 | |chr=chr11 | ||
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|distance_to_tss=76 | |distance_to_tss=76 | ||
|end=118428548 | |end=118428548 | ||
| + | |end_of_center_position=118428533 | ||
|entrez_id=56745 | |entrez_id=56745 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=1600017K21Rik | + | |gene_alias=1600017K21Rik |
|gene_description=C1q and tumor necrosis factor related protein 1 | |gene_description=C1q and tumor necrosis factor related protein 1 | ||
|gene_id=56745 | |gene_id=56745 | ||
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|species=mouse | |species=mouse | ||
|start=118428517 | |start=118428517 | ||
| + | |start_of_center_position=118428532 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC049894 | |transcript_name=BC049894 | ||
Revision as of 12:53, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 118428532 |
|---|---|
| End of the center position in the TSS region: | 118428533 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC049894 |
|---|---|
| Distance: | -2 |
| Num_trans: | 6 |
| All_trans: | BC049894:-2 ENSMUST00000017590.8:-19 AK005484:-19 NM_001204129:-61 uc007mpg.2:-61 ENSMUST00000124861.1:-315 |
TATA-Box annotation
| Distance to TSS: | 76 |
|---|---|
| Nearest PromoterID: | NM_001204129 |
| Entrez ID: | 56745 |
| Nearest Unigene: | Mm.23845 |
| Nearest Refseq: | NM_019959 |
| Nearest Ensembl: | ENSMUSG00000017446 |
| Gene Name: | C1q and tumor necrosis factor related protein 1 |
| Gene Alias: | 1600017K21Rik |
| Gene Description: | C1q and tumor necrosis factor related protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
