Difference between revisions of "TSS:Mm 100371.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.045 |distance= |distance_to_tss=-3150 |end=119089388 |entrez_id=12418 |gc_percent=0.61194 |gene_alias=MPc2|PC2 |gene_description=chromobo...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PC2= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 5: | Line 6: | ||
|distance_to_tss=-3150 | |distance_to_tss=-3150 | ||
|end=119089388 | |end=119089388 | ||
| + | |end_of_center_position=119089387 | ||
|entrez_id=12418 | |entrez_id=12418 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=MPc2 | + | |gene_alias=MPc2 |
|gene_description=chromobox 4 | |gene_description=chromobox 4 | ||
|gene_name=Cbx4 | |gene_name=Cbx4 | ||
| Line 18: | Line 20: | ||
|species=mouse | |species=mouse | ||
|start=119089385 | |start=119089385 | ||
| + | |start_of_center_position=119089386 | ||
|strand=+ | |strand=+ | ||
|tata_box="-87(ACCTTTATAAGA,-,0.00)" | |tata_box="-87(ACCTTTATAAGA,-,0.00)" | ||
Revision as of 12:58, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 119089386 |
|---|---|
| End of the center position in the TSS region: | 119089387 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -3150 |
|---|---|
| Nearest PromoterID: | NM_007625 |
| Entrez ID: | 12418 |
| Nearest Unigene: | Mm.268070 |
| Nearest Refseq: | NM_007625 |
| Nearest Ensembl: | ENSMUSG00000039989 |
| Gene Name: | Cbx4 |
| Gene Alias: | MPc2 |
| Gene Description: | chromobox 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-87(ACCTTTATAAGA,-,0.00)" |
