Difference between revisions of "TSS:Mm 161013.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000035935.8:64 NM_175430:64 uc007mqc.1:64 AK046971:64 uc007mqd.1:90 uc007mqe.1:90 BC072591:90 ENSMUST00000150358.7:91 ENSMUST00000147037.1:97 B...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |BC026530= | ||
| + | |Tcd1d16= | ||
|all_trans=ENSMUST00000035935.8:64 NM_175430:64 uc007mqc.1:64 AK046971:64 uc007mqd.1:90 uc007mqe.1:90 BC072591:90 ENSMUST00000150358.7:91 ENSMUST00000147037.1:97 BC085159:97 | |all_trans=ENSMUST00000035935.8:64 NM_175430:64 uc007mqc.1:64 AK046971:64 uc007mqd.1:90 uc007mqe.1:90 BC072591:90 ENSMUST00000150358.7:91 ENSMUST00000147037.1:97 BC085159:97 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-9 | |distance_to_tss=-9 | ||
|end=119228508 | |end=119228508 | ||
| + | |end_of_center_position=119228508 | ||
|entrez_id=207592 | |entrez_id=207592 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
| − | |gene_alias=B930087K01 | + | |gene_alias=B930087K01 |
|gene_description="TBC1 domain family, member 16" | |gene_description="TBC1 domain family, member 16" | ||
|gene_id=207607 | |gene_id=207607 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=119228507 | |start=119228507 | ||
| + | |start_of_center_position=119228507 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000035935.8 NM_175430 uc007mqc.1 AK046971 | |transcript_name=ENSMUST00000035935.8 NM_175430 uc007mqc.1 AK046971 | ||
Revision as of 12:59, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 119228507 |
|---|---|
| End of the center position in the TSS region: | 119228508 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000035935.8 NM_175430 uc007mqc.1 AK046971 |
|---|---|
| Distance: | 64 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000035935.8:64 NM_175430:64 uc007mqc.1:64 AK046971:64 uc007mqd.1:90 uc007mqe.1:90 BC072591:90 ENSMUST00000150358.7:91 ENSMUST00000147037.1:97 BC085159:97 |
TATA-Box annotation
| Distance to TSS: | -9 |
|---|---|
| Nearest PromoterID: | NM_172443 |
| Entrez ID: | 207592 |
| Nearest Unigene: | Mm.205263 |
| Nearest Refseq: | NM_172443 |
| Nearest Ensembl: | ENSMUSG00000039976 |
| Gene Name: | coiled-coil domain containing 40 |
| Gene Alias: | B930087K01 |
| Gene Description: | "TBC1 domain family, member 16" |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
