Difference between revisions of "TSS:Mm 100382.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000106250.7:0 AK086176:0 |chr=chr11 |cpg_percent=0.005 |distance=0 |distance_to_tss=-7020 |end=119307769 |entrez_id=170720 |gc_percent=0.542289...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |CARMA2= | ||
|all_trans=ENSMUST00000106250.7:0 AK086176:0 | |all_trans=ENSMUST00000106250.7:0 AK086176:0 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-7020 | |distance_to_tss=-7020 | ||
|end=119307769 | |end=119307769 | ||
| + | |end_of_center_position=119307767 | ||
|entrez_id=170720 | |entrez_id=170720 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=Bimp2 | + | |gene_alias=Bimp2 |
|gene_description="caspase recruitment domain family, member 14" | |gene_description="caspase recruitment domain family, member 14" | ||
|gene_id=170720 | |gene_id=170720 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=119307764 | |start=119307764 | ||
| + | |start_of_center_position=119307766 | ||
|strand=+ | |strand=+ | ||
|tata_box="-34(TTGTATATAAGG,-,0.00)" | |tata_box="-34(TTGTATATAAGG,-,0.00)" | ||
Revision as of 13:00, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 119307766 |
|---|---|
| End of the center position in the TSS region: | 119307767 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000106250.7 AK086176 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENSMUST00000106250.7:0 AK086176:0 |
TATA-Box annotation
| Distance to TSS: | -7020 |
|---|---|
| Nearest PromoterID: | NM_130886 |
| Entrez ID: | 170720 |
| Nearest Unigene: | Mm.130832 |
| Nearest Refseq: | NM_130886 |
| Nearest Ensembl: | ENSMUSG00000013483 |
| Gene Name: | "caspase recruitment domain family, member 14" |
| Gene Alias: | Bimp2 |
| Gene Description: | "caspase recruitment domain family, member 14" |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(TTGTATATAAGG,-,0.00)" |
