Difference between revisions of "TSS:Mm 100383.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AF363457:-20 ENSMUST00000053245.6:-41 NM_130886:-41 BC029102:-41 uc007mqk.1:-119 |chr=chr11 |cpg_percent=0.025 |distance=-20 |distance_to_tss=56 |end=11...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |CARMA2= | ||
|all_trans=AF363457:-20 ENSMUST00000053245.6:-41 NM_130886:-41 BC029102:-41 uc007mqk.1:-119 | |all_trans=AF363457:-20 ENSMUST00000053245.6:-41 NM_130886:-41 BC029102:-41 uc007mqk.1:-119 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=56 | |distance_to_tss=56 | ||
|end=119314859 | |end=119314859 | ||
| + | |end_of_center_position=119314844 | ||
|entrez_id=170720 | |entrez_id=170720 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias=Bimp2 | + | |gene_alias=Bimp2 |
|gene_description="caspase recruitment domain family, member 14" | |gene_description="caspase recruitment domain family, member 14" | ||
|gene_id=170720 | |gene_id=170720 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=119314827 | |start=119314827 | ||
| + | |start_of_center_position=119314843 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AF363457 | |transcript_name=AF363457 | ||
Revision as of 13:00, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 119314843 |
|---|---|
| End of the center position in the TSS region: | 119314844 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF363457 |
|---|---|
| Distance: | -20 |
| Num_trans: | 5 |
| All_trans: | AF363457:-20 ENSMUST00000053245.6:-41 NM_130886:-41 BC029102:-41 uc007mqk.1:-119 |
TATA-Box annotation
| Distance to TSS: | 56 |
|---|---|
| Nearest PromoterID: | NM_130886 |
| Entrez ID: | 170720 |
| Nearest Unigene: | Mm.130832 |
| Nearest Refseq: | NM_130886 |
| Nearest Ensembl: | ENSMUSG00000013483 |
| Gene Name: | "caspase recruitment domain family, member 14" |
| Gene Alias: | Bimp2 |
| Gene Description: | "caspase recruitment domain family, member 14" |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
