Difference between revisions of "TSS:Mm 100394.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000157390.1:-35 NR_035453:-35 uc011yis.1:-35 |chr=chr11 |cpg_percent=0.075 |distance=-35 |distance_to_tss=42 |end=119390522 |entrez_id=10031669...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=42 | |distance_to_tss=42 | ||
|end=119390522 | |end=119390522 | ||
| + | |end_of_center_position=119390515 | ||
|entrez_id=100316690 | |entrez_id=100316690 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias= | + | |gene_alias=mir-1932 |
|gene_description=microRNA 1932 | |gene_description=microRNA 1932 | ||
|gene_id=100316690 | |gene_id=100316690 | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=MGI:3836969 | |hgnc_mgi_id=MGI:3836969 | ||
| + | |mmu-mir-1932= | ||
|nearest_ensembl=ENSMUSG00000088015 | |nearest_ensembl=ENSMUSG00000088015 | ||
|nearest_promoter_id=NR_035453 | |nearest_promoter_id=NR_035453 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=119390506 | |start=119390506 | ||
| + | |start_of_center_position=119390514 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000157390.1 NR_035453 uc011yis.1 | |transcript_name=ENSMUST00000157390.1 NR_035453 uc011yis.1 | ||
Revision as of 13:01, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 119390514 |
|---|---|
| End of the center position in the TSS region: | 119390515 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000157390.1 NR_035453 uc011yis.1 |
|---|---|
| Distance: | -35 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000157390.1:-35 NR_035453:-35 uc011yis.1:-35 |
TATA-Box annotation
| Distance to TSS: | 42 |
|---|---|
| Nearest PromoterID: | NR_035453 |
| Entrez ID: | 100316690 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_035453 |
| Nearest Ensembl: | ENSMUSG00000088015 |
| Gene Name: | microRNA 1932 |
| Gene Alias: | mir-1932 |
| Gene Description: | microRNA 1932 |
| Gene Type: | ncRNA |
| CpG%: | 0.075 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
