Personal tools

Difference between revisions of "TSS:Mm 100433.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=uc007mqr.1:-20 AK217856:-20 |chr=chr11 |cpg_percent=0.01 |distance=-20 |distance_to_tss=-22286 |end=119469068 |entrez_id=338371 |gc_percent=0.467662 |ge...")
 
Line 6: Line 6:
 
|distance_to_tss=-22286
 
|distance_to_tss=-22286
 
|end=119469068
 
|end=119469068
 +
|end_of_center_position=119469062
 
|entrez_id=338371
 
|entrez_id=338371
 
|gc_percent=0.467662
 
|gc_percent=0.467662
Line 24: Line 25:
 
|species=mouse
 
|species=mouse
 
|start=119469054
 
|start=119469054
 +
|start_of_center_position=119469061
 
|strand=+
 
|strand=+
 
|transcript_name=uc007mqr.1 AK217856
 
|transcript_name=uc007mqr.1 AK217856

Revision as of 13:04, 12 May 2019

Basic information about the TSS


TSS ID:mm_100433.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:119469054
End:119469068
Strand:+
TSS Score:1
Start of the center position in the TSS region:119469061
End of the center position in the TSS region:119469062



Gene and protein annotation


Transcript_name:uc007mqr.1 AK217856
Distance:-20
GeneID:672511
HGNC/MGI_ID:MGI:1289196
UniProt_ID:
Gene_name:ring finger protein 213
Gene_symbol:Rnf213
Gene_synonyms:D11Ertd759e
Gene_source:MGI:1289196



Transcript annotation


Transcript_name:uc007mqr.1 AK217856
Distance:-20
Num_trans:2
All_trans:uc007mqr.1:-20 AK217856:-20



TATA-Box annotation


Distance to TSS:-22286
Nearest PromoterID:NM_001164636
Entrez ID:338371
Nearest Unigene:Mm.271946
Nearest Refseq:NM_177394
Nearest Ensembl:ENSMUSG00000039850
Gene Name:ring finger protein 213
Gene Alias:A730011L01Rik
Gene Description:endonuclease V
Gene Type:protein-coding
CpG%:0.01
GC%:0.467662
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):