Difference between revisions of "TSS:Mm 100448.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000130049.7:0 ENSMUST00000147772.7:0 uc007mqw.1:0 uc007mqx.1:0 uc007mqy.1:0 uc007mqz.1:0 uc011yit.1:0 AK087217:0 AK029341:0 AK144082:0 AK172276...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Rap= | ||
| + | |Raptor= | ||
|all_trans=ENSMUST00000130049.7:0 ENSMUST00000147772.7:0 uc007mqw.1:0 uc007mqx.1:0 uc007mqy.1:0 uc007mqz.1:0 uc011yit.1:0 AK087217:0 AK029341:0 AK144082:0 AK172276:0 ENSMUST00000125583.7:-77 NM_001306081:-77 NM_028898:-77 AK161011:-77 ENSMUST00000026671.12:115 | |all_trans=ENSMUST00000130049.7:0 ENSMUST00000147772.7:0 uc007mqw.1:0 uc007mqx.1:0 uc007mqy.1:0 uc007mqz.1:0 uc011yit.1:0 AK087217:0 AK029341:0 AK144082:0 AK172276:0 ENSMUST00000125583.7:-77 NM_001306081:-77 NM_028898:-77 AK161011:-77 ENSMUST00000026671.12:115 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=103 | |distance_to_tss=103 | ||
|end=119603034 | |end=119603034 | ||
| + | |end_of_center_position=119603008 | ||
|entrez_id=74370 | |entrez_id=74370 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=4932417H02Rik | + | |gene_alias=4932417H02Rik |
|gene_description="regulatory associated protein of MTOR, complex 1" | |gene_description="regulatory associated protein of MTOR, complex 1" | ||
|gene_id=74370 | |gene_id=74370 | ||
| Line 17: | Line 20: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1921620 | |hgnc_mgi_id=MGI:1921620 | ||
| + | |mKIAA1303= | ||
|nearest_ensembl=ENSMUSG00000025583 | |nearest_ensembl=ENSMUSG00000025583 | ||
|nearest_promoter_id=NM_028898 | |nearest_promoter_id=NM_028898 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=119602981 | |start=119602981 | ||
| + | |start_of_center_position=119603007 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000130049.7 ENSMUST00000147772.7 uc007mqw.1 uc007mqx.1 uc007mqy.1 uc007mqz.1 uc011yit.1 AK087217 AK029341 AK144082 AK172276 | |transcript_name=ENSMUST00000130049.7 ENSMUST00000147772.7 uc007mqw.1 uc007mqx.1 uc007mqy.1 uc007mqz.1 uc011yit.1 AK087217 AK029341 AK144082 AK172276 | ||
Revision as of 13:06, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 119603007 |
|---|---|
| End of the center position in the TSS region: | 119603008 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000130049.7 ENSMUST00000147772.7 uc007mqw.1 uc007mqx.1 uc007mqy.1 uc007mqz.1 uc011yit.1 AK087217 AK029341 AK144082 AK172276 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENSMUST00000130049.7:0 ENSMUST00000147772.7:0 uc007mqw.1:0 uc007mqx.1:0 uc007mqy.1:0 uc007mqz.1:0 uc011yit.1:0 AK087217:0 AK029341:0 AK144082:0 AK172276:0 ENSMUST00000125583.7:-77 NM_001306081:-77 NM_028898:-77 AK161011:-77 ENSMUST00000026671.12:115 |
TATA-Box annotation
| Distance to TSS: | 103 |
|---|---|
| Nearest PromoterID: | NM_028898 |
| Entrez ID: | 74370 |
| Nearest Unigene: | Mm.209933 |
| Nearest Refseq: | NM_028898 |
| Nearest Ensembl: | ENSMUSG00000025583 |
| Gene Name: | "regulatory associated protein of MTOR, complex 1" |
| Gene Alias: | 4932417H02Rik |
| Gene Description: | "regulatory associated protein of MTOR, complex 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
