Difference between revisions of "TSS:Mm 100469.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001037754:0 NM_001037755:0 NM_130862:0 uc007mrg.1:0 uc007mrh.1:0 uc007mri.1:0 uc007mrj.2:0 AK160401:0 AK145924:0 AK049469:0 AK170190:0 BC006620:2 BC0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |R75030= | ||
|all_trans=NM_001037754:0 NM_001037755:0 NM_130862:0 uc007mrg.1:0 uc007mrh.1:0 uc007mri.1:0 uc007mrj.2:0 AK160401:0 AK145924:0 AK049469:0 AK170190:0 BC006620:2 BC016411:2 ENSMUST00000152523.7:17 AF390178:35 AF390179:35 ENSMUST00000103021.9:-320 ENSMUST00000075180.11:-320 ENSMUST00000106231.7:-320 ENSMUST00000106233.1:-320 ENSMUST00000026436.9:-320 ENSMUST00000146566.1:373 AK158579:373 | |all_trans=NM_001037754:0 NM_001037755:0 NM_130862:0 uc007mrg.1:0 uc007mrh.1:0 uc007mri.1:0 uc007mrj.2:0 AK160401:0 AK145924:0 AK049469:0 AK170190:0 BC006620:2 BC016411:2 ENSMUST00000152523.7:17 AF390178:35 AF390179:35 ENSMUST00000103021.9:-320 ENSMUST00000075180.11:-320 ENSMUST00000106231.7:-320 ENSMUST00000106233.1:-320 ENSMUST00000026436.9:-320 ENSMUST00000146566.1:373 AK158579:373 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-1 | |distance_to_tss=-1 | ||
|end=119943099 | |end=119943099 | ||
| + | |end_of_center_position=119943091 | ||
|entrez_id=108100 | |entrez_id=108100 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=IRSp53 | + | |gene_alias=IRSp53 |
|gene_description=brain-specific angiogenesis inhibitor 1-associated protein 2 | |gene_description=brain-specific angiogenesis inhibitor 1-associated protein 2 | ||
|gene_id=108100 | |gene_id=108100 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=119943082 | |start=119943082 | ||
| + | |start_of_center_position=119943090 | ||
|strand=+ | |strand=+ | ||
|tata_box="-35(GGCTATAAAAGC,-,0.00)" | |tata_box="-35(GGCTATAAAAGC,-,0.00)" | ||
Revision as of 13:08, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 119943090 |
|---|---|
| End of the center position in the TSS region: | 119943091 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001037754 NM_001037755 NM_130862 uc007mrg.1 uc007mrh.1 uc007mri.1 uc007mrj.2 AK160401 AK145924 AK049469 AK170190 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | NM_001037754:0 NM_001037755:0 NM_130862:0 uc007mrg.1:0 uc007mrh.1:0 uc007mri.1:0 uc007mrj.2:0 AK160401:0 AK145924:0 AK049469:0 AK170190:0 BC006620:2 BC016411:2 ENSMUST00000152523.7:17 AF390178:35 AF390179:35 ENSMUST00000103021.9:-320 ENSMUST00000075180.11:-320 ENSMUST00000106231.7:-320 ENSMUST00000106233.1:-320 ENSMUST00000026436.9:-320 ENSMUST00000146566.1:373 AK158579:373 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001037754 |
| Entrez ID: | 108100 |
| Nearest Unigene: | Mm.197534 |
| Nearest Refseq: | NM_130862 |
| Nearest Ensembl: | ENSMUSG00000025372 |
| Gene Name: | brain-specific angiogenesis inhibitor 1-associated protein 2 |
| Gene Alias: | IRSp53 |
| Gene Description: | brain-specific angiogenesis inhibitor 1-associated protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(GGCTATAAAAGC,-,0.00)" |
