Difference between revisions of "TSS:Mm 100474.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000106223.3:0 ENSMUST00000185558.1:0 NM_001110242:0 uc007mru.2:0 AK010111:0 AK007756:0 BC147711:0 BC147720:0 ENSMUST00000186913.1:116 |chr=chr1...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=13 | |distance_to_tss=13 | ||
|end=120098983 | |end=120098983 | ||
| + | |end_of_center_position=120098947 | ||
|entrez_id=208501 | |entrez_id=208501 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=120098910 | |start=120098910 | ||
| + | |start_of_center_position=120098946 | ||
|strand=+ | |strand=+ | ||
|tata_box="16(GAGCCTAAAAGG,-,0.00)" | |tata_box="16(GAGCCTAAAAGG,-,0.00)" | ||
Revision as of 13:10, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 120098946 |
|---|---|
| End of the center position in the TSS region: | 120098947 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000106223.3 ENSMUST00000185558.1 NM_001110242 uc007mru.2 AK010111 AK007756 BC147711 BC147720 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000106223.3:0 ENSMUST00000185558.1:0 NM_001110242:0 uc007mru.2:0 AK010111:0 AK007756:0 BC147711:0 BC147720:0 ENSMUST00000186913.1:116 |
TATA-Box annotation
| Distance to TSS: | 13 |
|---|---|
| Nearest PromoterID: | NM_001110242 |
| Entrez ID: | 208501 |
| Nearest Unigene: | Mm.46699 |
| Nearest Refseq: | NM_001110242 |
| Nearest Ensembl: | ENSMUSG00000078572 |
| Gene Name: | RIKEN cDNA 1810043H04 gene |
| Gene Alias: | 1810043H04Rik |
| Gene Description: | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "16(GAGCCTAAAAGG,-,0.00)" |
