Difference between revisions of "TSS:Mm 100498.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK181676:-394 AK216327:-394 AK209356:-394 AK205770:-394 AK183749:-394 |chr=chr11 |cpg_percent=0.01 |distance=-394 |distance_to_tss=-4619 |end=120480058...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |1500031N16Rik= | ||
| + | |MRP-L12= | ||
| + | |Rpml12= | ||
|all_trans=AK181676:-394 AK216327:-394 AK209356:-394 AK205770:-394 AK183749:-394 | |all_trans=AK181676:-394 AK216327:-394 AK209356:-394 AK205770:-394 AK183749:-394 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-4619 | |distance_to_tss=-4619 | ||
|end=120480058 | |end=120480058 | ||
| + | |end_of_center_position=120480050 | ||
|entrez_id=56282 | |entrez_id=56282 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=0610034O11Rik | + | |gene_alias=0610034O11Rik |
|gene_description=mitochondrial ribosomal protein L12 | |gene_description=mitochondrial ribosomal protein L12 | ||
|gene_id=15239 | |gene_id=15239 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=120480041 | |start=120480041 | ||
| + | |start_of_center_position=120480049 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK181676 AK216327 AK209356 AK205770 AK183749 | |transcript_name=AK181676 AK216327 AK209356 AK205770 AK183749 | ||
Revision as of 13:15, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 120480049 |
|---|---|
| End of the center position in the TSS region: | 120480050 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK181676 AK216327 AK209356 AK205770 AK183749 |
|---|---|
| Distance: | -394 |
| Num_trans: | 5 |
| All_trans: | AK181676:-394 AK216327:-394 AK209356:-394 AK205770:-394 AK183749:-394 |
TATA-Box annotation
| Distance to TSS: | -4619 |
|---|---|
| Nearest PromoterID: | NM_027204 |
| Entrez ID: | 56282 |
| Nearest Unigene: | Mm.133851 |
| Nearest Refseq: | NM_027204 |
| Nearest Ensembl: | ENSMUSG00000039640 |
| Gene Name: | HGF-regulated tyrosine kinase substrate |
| Gene Alias: | 0610034O11Rik |
| Gene Description: | mitochondrial ribosomal protein L12 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
