Difference between revisions of "TSS:Mm 100540.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |ASPC= | ||
| + | |ASPCR1= | ||
| + | |ASPL= | ||
| + | |ASPS= | ||
| + | |RCC17= | ||
| + | |TUG= | ||
|all_trans=ENSMUST00000026135.14:-7 ENSMUST00000171700.1:17 AK162722:17 ENSMUST00000169964.1:-26 NM_026877:-26 uc007mua.2:-26 BC022115:29 BC019177:32 BC031153:32 ENSMUST00000106158.8:47 AY349133:47 ENSMUST00000168097.7:54 ENSMUST00000103016.7:55 ENSMUST00000168714.7:74 ENSMUST00000143844.8:89 AK088197:114 ENSMUST00000135346.7:350 ENSMUST00000127269.7:365 ENSMUST00000131727.8:365 ENSMUST00000149389.7:383 ENSMUST00000153346.7:395 | |all_trans=ENSMUST00000026135.14:-7 ENSMUST00000171700.1:17 AK162722:17 ENSMUST00000169964.1:-26 NM_026877:-26 uc007mua.2:-26 BC022115:29 BC019177:32 BC031153:32 ENSMUST00000106158.8:47 AY349133:47 ENSMUST00000168097.7:54 ENSMUST00000103016.7:55 ENSMUST00000168714.7:74 ENSMUST00000143844.8:89 AK088197:114 ENSMUST00000135346.7:350 ENSMUST00000127269.7:365 ENSMUST00000131727.8:365 ENSMUST00000149389.7:383 ENSMUST00000153346.7:395 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=31 | |distance_to_tss=31 | ||
|end=120673009 | |end=120673009 | ||
| + | |end_of_center_position=120673004 | ||
|entrez_id=68938 | |entrez_id=68938 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=1190006K01Rik | + | |gene_alias=1190006K01Rik |
|gene_description="alveolar soft part sarcoma chromosome region, candidate 1 (human)" | |gene_description="alveolar soft part sarcoma chromosome region, candidate 1 (human)" | ||
|gene_id=68938 | |gene_id=68938 | ||
| Line 24: | Line 31: | ||
|species=mouse | |species=mouse | ||
|start=120672998 | |start=120672998 | ||
| + | |start_of_center_position=120673003 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000026135.14 | |transcript_name=ENSMUST00000026135.14 | ||
Revision as of 13:23, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120673003 |
|---|---|
| End of the center position in the TSS region: | 120673004 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000026135.14 |
|---|---|
| Distance: | -7 |
| Num_trans: | 21 |
| All_trans: | ENSMUST00000026135.14:-7 ENSMUST00000171700.1:17 AK162722:17 ENSMUST00000169964.1:-26 NM_026877:-26 uc007mua.2:-26 BC022115:29 BC019177:32 BC031153:32 ENSMUST00000106158.8:47 AY349133:47 ENSMUST00000168097.7:54 ENSMUST00000103016.7:55 ENSMUST00000168714.7:74 ENSMUST00000143844.8:89 AK088197:114 ENSMUST00000135346.7:350 ENSMUST00000127269.7:365 ENSMUST00000131727.8:365 ENSMUST00000149389.7:383 ENSMUST00000153346.7:395 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NM_026877 |
| Entrez ID: | 68938 |
| Nearest Unigene: | Mm.294020 |
| Nearest Refseq: | NM_026877 |
| Nearest Ensembl: | ENSMUSG00000025142 |
| Gene Name: | "alveolar soft part sarcoma chromosome region, candidate 1 (human)" |
| Gene Alias: | 1190006K01Rik |
| Gene Description: | "alveolar soft part sarcoma chromosome region, candidate 1 (human)" |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
