Difference between revisions of "TSS:Mm 100586.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |Mct4= | ||
|all_trans=NM_030696:-231 uc007muw.1:-231 BC046525:-231 ENSMUST00000070653.12:-235 ENSMUST00000154187.7:307 ENSMUST00000100130.9:321 NM_001038654:321 NM_001038653:321 uc007mux.1:321 uc007muy.1:321 AK149707:321 AK149983:321 ENSMUST00000129473.7:325 AK141381:325 ENSMUST00000168579.7:335 AK171260:335 AK166048:335 AK169917:359 AK165596:381 | |all_trans=NM_030696:-231 uc007muw.1:-231 BC046525:-231 ENSMUST00000070653.12:-235 ENSMUST00000154187.7:307 ENSMUST00000100130.9:321 NM_001038654:321 NM_001038653:321 uc007mux.1:321 uc007muy.1:321 AK149707:321 AK149983:321 ENSMUST00000129473.7:325 AK141381:325 ENSMUST00000168579.7:335 AK171260:335 AK166048:335 AK169917:359 AK165596:381 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=246 | |distance_to_tss=246 | ||
|end=120948746 | |end=120948746 | ||
| + | |end_of_center_position=120948731 | ||
|entrez_id=80879 | |entrez_id=80879 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=Mct3 | + | |gene_alias=Mct3 |
|gene_description="solute carrier family 16 (monocarboxylic acid transporters), member 3" | |gene_description="solute carrier family 16 (monocarboxylic acid transporters), member 3" | ||
|gene_id=80879 | |gene_id=80879 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=120948714 | |start=120948714 | ||
| + | |start_of_center_position=120948730 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_030696 uc007muw.1 BC046525 | |transcript_name=NM_030696 uc007muw.1 BC046525 | ||
Revision as of 13:31, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 120948730 |
|---|---|
| End of the center position in the TSS region: | 120948731 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_030696 uc007muw.1 BC046525 |
|---|---|
| Distance: | -231 |
| Num_trans: | 19 |
| All_trans: | NM_030696:-231 uc007muw.1:-231 BC046525:-231 ENSMUST00000070653.12:-235 ENSMUST00000154187.7:307 ENSMUST00000100130.9:321 NM_001038654:321 NM_001038653:321 uc007mux.1:321 uc007muy.1:321 AK149707:321 AK149983:321 ENSMUST00000129473.7:325 AK141381:325 ENSMUST00000168579.7:335 AK171260:335 AK166048:335 AK169917:359 AK165596:381 |
TATA-Box annotation
| Distance to TSS: | 246 |
|---|---|
| Nearest PromoterID: | NM_030696 |
| Entrez ID: | 80879 |
| Nearest Unigene: | Mm.28632 |
| Nearest Refseq: | NM_030696 |
| Nearest Ensembl: | ENSMUSG00000025161 |
| Gene Name: | "solute carrier family 16 (monocarboxylic acid transporters), member 3" |
| Gene Alias: | Mct3 |
| Gene Description: | "solute carrier family 16 (monocarboxylic acid transporters), member 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
