Difference between revisions of "TSS:Mm 100588.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK165596:-390 AK169917:-412 ENSMUST00000168579.7:-436 AK171260:-436 AK166048:-436 ENSMUST00000129473.7:-446 AK141381:-446 ENSMUST00000100130.9:-450 NM_0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Mct4= | ||
|all_trans=AK165596:-390 AK169917:-412 ENSMUST00000168579.7:-436 AK171260:-436 AK166048:-436 ENSMUST00000129473.7:-446 AK141381:-446 ENSMUST00000100130.9:-450 NM_001038654:-450 NM_001038653:-450 uc007mux.1:-450 uc007muy.1:-450 AK149707:-450 AK149983:-450 ENSMUST00000154187.7:-464 | |all_trans=AK165596:-390 AK169917:-412 ENSMUST00000168579.7:-436 AK171260:-436 AK166048:-436 ENSMUST00000129473.7:-446 AK141381:-446 ENSMUST00000100130.9:-450 NM_001038654:-450 NM_001038653:-450 uc007mux.1:-450 uc007muy.1:-450 AK149707:-450 AK149983:-450 ENSMUST00000154187.7:-464 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=451 | |distance_to_tss=451 | ||
|end=120949519 | |end=120949519 | ||
| + | |end_of_center_position=120949518 | ||
|entrez_id=80879 | |entrez_id=80879 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=Mct3 | + | |gene_alias=Mct3 |
|gene_description="solute carrier family 16 (monocarboxylic acid transporters), member 3" | |gene_description="solute carrier family 16 (monocarboxylic acid transporters), member 3" | ||
|gene_id=80879 | |gene_id=80879 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=120949516 | |start=120949516 | ||
| + | |start_of_center_position=120949517 | ||
|strand=+ | |strand=+ | ||
|tata_box="-33(GAGTATAAATAG,-,0.00)" | |tata_box="-33(GAGTATAAATAG,-,0.00)" | ||
Revision as of 13:31, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 120949517 |
|---|---|
| End of the center position in the TSS region: | 120949518 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK165596 |
|---|---|
| Distance: | -390 |
| Num_trans: | 15 |
| All_trans: | AK165596:-390 AK169917:-412 ENSMUST00000168579.7:-436 AK171260:-436 AK166048:-436 ENSMUST00000129473.7:-446 AK141381:-446 ENSMUST00000100130.9:-450 NM_001038654:-450 NM_001038653:-450 uc007mux.1:-450 uc007muy.1:-450 AK149707:-450 AK149983:-450 ENSMUST00000154187.7:-464 |
TATA-Box annotation
| Distance to TSS: | 451 |
|---|---|
| Nearest PromoterID: | NM_001038654 |
| Entrez ID: | 80879 |
| Nearest Unigene: | Mm.28632 |
| Nearest Refseq: | NM_030696 |
| Nearest Ensembl: | ENSMUSG00000025161 |
| Gene Name: | "solute carrier family 16 (monocarboxylic acid transporters), member 3" |
| Gene Alias: | Mct3 |
| Gene Description: | "solute carrier family 16 (monocarboxylic acid transporters), member 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-33(GAGTATAAATAG,-,0.00)" |
