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Difference between revisions of "TSS:Hg 188291.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000451648.1:16 uc061yjb.1:16 ENST00000433126.1:21 uc002ydd.4:21 NR_024470:22 BC025345:22 ENST00000411824.1:-67 uc061yjc.1:-67 KJ901023:97 |chr=chr...")
 
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|distance_to_tss=-29
 
|distance_to_tss=-29
 
|end=62666657
 
|end=62666657
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|end_of_center_position=62666650
 
|entrez_id=100127888
 
|entrez_id=100127888
 
|gc_percent=0.661692
 
|gc_percent=0.661692
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|species=human
 
|species=human
 
|start=62666642
 
|start=62666642
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|start_of_center_position=62666649
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000451648.1 uc061yjb.1
 
|transcript_name=ENST00000451648.1 uc061yjb.1

Revision as of 13:42, 12 May 2019

Basic information about the TSS


TSS ID:hg_188291.1
Species:human
Chr:chr20
TSS Classification:yes
Start:62666642
End:62666657
Strand:-
TSS Score:1
Start of the center position in the TSS region:62666649
End of the center position in the TSS region:62666650



Gene and protein annotation


Transcript_name:ENST00000451648.1 uc061yjb.1
Distance:16
GeneID:100127888
HGNC/MGI_ID:HGNC:40537
UniProt_ID:
Gene_name:SLCO4A1 antisense RNA 1
Gene_symbol:SLCO4A1-AS1
Gene_synonyms:
Gene_source:HGNC:40537



Transcript annotation


Transcript_name:ENST00000451648.1 uc061yjb.1
Distance:16
Num_trans:9
All_trans:ENST00000451648.1:16 uc061yjb.1:16 ENST00000433126.1:21 uc002ydd.4:21 NR_024470:22 BC025345:22 ENST00000411824.1:-67 uc061yjc.1:-67 KJ901023:97



TATA-Box annotation


Distance to TSS:-29
Nearest PromoterID:NR_024470
Entrez ID:100127888
Nearest Unigene:Hs.671273
Nearest Refseq:NR_024470
Nearest Ensembl:ENSG00000232803
Gene Name:SLCO4A1 antisense RNA 1
Gene Alias:-
Gene Description:SLCO4A1 antisense RNA 1
Gene Type:ncRNA
CpG%:0.065
GC%:0.661692
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):