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Difference between revisions of "TSS:Hg 188292.1"

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(Created page with "{{TSSDetail |all_trans=ENST00000411824.1:-38 uc061yjc.1:-38 ENST00000451648.1:43 uc061yjb.1:43 ENST00000433126.1:48 uc002ydd.4:48 NR_024470:49 BC025345:49 KJ901023:124 |chr=ch...")
 
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|distance_to_tss=-57
 
|distance_to_tss=-57
 
|end=62666686
 
|end=62666686
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|end_of_center_position=62666678
 
|entrez_id=100127888
 
|entrez_id=100127888
 
|gc_percent=0.661692
 
|gc_percent=0.661692
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|species=human
 
|species=human
 
|start=62666669
 
|start=62666669
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|start_of_center_position=62666677
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000411824.1 uc061yjc.1
 
|transcript_name=ENST00000411824.1 uc061yjc.1

Revision as of 13:42, 12 May 2019

Basic information about the TSS


TSS ID:hg_188292.1
Species:human
Chr:chr20
TSS Classification:yes
Start:62666669
End:62666686
Strand:-
TSS Score:1
Start of the center position in the TSS region:62666677
End of the center position in the TSS region:62666678



Gene and protein annotation


Transcript_name:ENST00000411824.1 uc061yjc.1
Distance:-38
GeneID:100127888
HGNC/MGI_ID:HGNC:40537
UniProt_ID:
Gene_name:SLCO4A1 antisense RNA 1
Gene_symbol:SLCO4A1-AS1
Gene_synonyms:
Gene_source:HGNC:40537



Transcript annotation


Transcript_name:ENST00000411824.1 uc061yjc.1
Distance:-38
Num_trans:9
All_trans:ENST00000411824.1:-38 uc061yjc.1:-38 ENST00000451648.1:43 uc061yjb.1:43 ENST00000433126.1:48 uc002ydd.4:48 NR_024470:49 BC025345:49 KJ901023:124



TATA-Box annotation


Distance to TSS:-57
Nearest PromoterID:NR_024470
Entrez ID:100127888
Nearest Unigene:Hs.671273
Nearest Refseq:NR_024470
Nearest Ensembl:ENSG00000232803
Gene Name:SLCO4A1 antisense RNA 1
Gene Alias:-
Gene Description:SLCO4A1 antisense RNA 1
Gene Type:ncRNA
CpG%:0.05
GC%:0.661692
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):