Difference between revisions of "TSS:Hg 38343.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000485843.1:-28 BC041080:-28 BC032772:-32 ENST00000486431.5:-33 ENST00000484500.5:-34 ENST00000467239.5:-38 NR_024251:-57 NR_024250:-57 |chr=chr3...") |
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|distance_to_tss=63 | |distance_to_tss=63 | ||
|end=125916671 | |end=125916671 | ||
| + | |end_of_center_position=125916665 | ||
|entrez_id=100125556 | |entrez_id=100125556 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
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|species=human | |species=human | ||
|start=125916657 | |start=125916657 | ||
| + | |start_of_center_position=125916664 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000485843.1 BC041080 | |transcript_name=ENST00000485843.1 BC041080 | ||
Revision as of 08:18, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 125916664 |
|---|---|
| End of the center position in the TSS region: | 125916665 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000485843.1 BC041080 |
|---|---|
| Distance: | -28 |
| Num_trans: | 8 |
| All_trans: | ENST00000485843.1:-28 BC041080:-28 BC032772:-32 ENST00000486431.5:-33 ENST00000484500.5:-34 ENST00000467239.5:-38 NR_024251:-57 NR_024250:-57 |
TATA-Box annotation
| Distance to TSS: | 63 |
|---|---|
| Nearest PromoterID: | NR_024251 |
| Entrez ID: | 100125556 |
| Nearest Unigene: | Hs.553949 |
| Nearest Refseq: | NR_024250 |
| Nearest Ensembl: | ENSG00000171084 |
| Gene Name: | "family with sequence similarity 86 member J, pseudogene" |
| Gene Alias: | - |
| Gene Description: | "family with sequence similarity 86, member A pseudogene" |
| Gene Type: | pseudo |
| CpG%: | 0.125 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
