Difference between revisions of "TSS:Mm 123921.1"
From referenceTSS
| Line 11: | Line 11: | ||
|distance_to_tss=20585 | |distance_to_tss=20585 | ||
|end=73364693 | |end=73364693 | ||
| + | |end_of_center_position=73364686 | ||
|entrez_id=16432 | |entrez_id=16432 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=AI256040 | + | |gene_alias=AI256040 |
|gene_description=integral membrane protein 2B | |gene_description=integral membrane protein 2B | ||
|gene_id=16432 | |gene_id=16432 | ||
| Line 33: | Line 34: | ||
|species=mouse | |species=mouse | ||
|start=73364678 | |start=73364678 | ||
| + | |start_of_center_position=73364685 | ||
|strand=- | |strand=- | ||
|tata_box="-93(CTGTTTTAAAAG,-,0.00),-92(TGTTTTAAAAGC,-,0.00),-91(GTTTTAAAAGCA,+,0.00)" | |tata_box="-93(CTGTTTTAAAAG,-,0.00),-92(TGTTTTAAAAGC,-,0.00),-91(GTTTTAAAAGCA,+,0.00)" | ||
Revision as of 11:21, 13 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 73364685 |
|---|---|
| End of the center position in the TSS region: | 73364686 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK210559 |
|---|---|
| Distance: | 55 |
| Num_trans: | 3 |
| All_trans: | AK210559:55 AK200695:57 AK008861:124 |
TATA-Box annotation
| Distance to TSS: | 20585 |
|---|---|
| Nearest PromoterID: | NM_008410 |
| Entrez ID: | 16432 |
| Nearest Unigene: | Mm.4266 |
| Nearest Refseq: | NM_008410 |
| Nearest Ensembl: | ENSMUSG00000022108 |
| Gene Name: | integral membrane protein 2B |
| Gene Alias: | AI256040 |
| Gene Description: | integral membrane protein 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-93(CTGTTTTAAAAG,-,0.00),-92(TGTTTTAAAAGC,-,0.00),-91(GTTTTAAAAGCA,+,0.00)" |
