Difference between revisions of "TSS:Hg 53367.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=DQ892212:-27 KJ894532:-27 DQ895407:-27 CU680230:-27 |chr=chr4 |cpg_percent=0.13 |distance=-27 |distance_to_tss=562 |end=102344635 |entrez_id=64116 |gc_p...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CDG2N= | ||
| + | |LZT-Hs6= | ||
| + | |PP3105= | ||
| + | |ZIP8= | ||
|all_trans=DQ892212:-27 KJ894532:-27 DQ895407:-27 CU680230:-27 | |all_trans=DQ892212:-27 KJ894532:-27 DQ895407:-27 CU680230:-27 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=562 | |distance_to_tss=562 | ||
|end=102344635 | |end=102344635 | ||
| + | |end_of_center_position=102344630 | ||
|entrez_id=64116 | |entrez_id=64116 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=BIGM103 | + | |gene_alias=BIGM103 |
|gene_description=solute carrier family 39 member 8 | |gene_description=solute carrier family 39 member 8 | ||
|gene_id=64116 | |gene_id=64116 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=102344623 | |start=102344623 | ||
| + | |start_of_center_position=102344629 | ||
|strand=- | |strand=- | ||
|transcript_name=DQ892212 KJ894532 DQ895407 CU680230 | |transcript_name=DQ892212 KJ894532 DQ895407 CU680230 | ||
Revision as of 20:44, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 102344629 |
|---|---|
| End of the center position in the TSS region: | 102344630 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | DQ892212 KJ894532 DQ895407 CU680230 |
|---|---|
| Distance: | -27 |
| Num_trans: | 4 |
| All_trans: | DQ892212:-27 KJ894532:-27 DQ895407:-27 CU680230:-27 |
TATA-Box annotation
| Distance to TSS: | 562 |
|---|---|
| Nearest PromoterID: | NM_022154 |
| Entrez ID: | 64116 |
| Nearest Unigene: | Hs.288034 |
| Nearest Refseq: | NM_022154 |
| Nearest Ensembl: | ENSG00000138821 |
| Gene Name: | solute carrier family 39 member 8 |
| Gene Alias: | BIGM103 |
| Gene Description: | solute carrier family 39 member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
