Difference between revisions of "TSS:Hg 53377.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000394833.6:-86 uc003hwb.2:-86 AB040120:-86 NM_022154:-138 ENST00000424970.6:-152 uc011ceo.2:-152 AK304274:-152 NM_001135147:-200 DQ892212:375 KJ8...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |CDG2N= | ||
| + | |LZT-Hs6= | ||
| + | |PP3105= | ||
| + | |ZIP8= | ||
|all_trans=ENST00000394833.6:-86 uc003hwb.2:-86 AB040120:-86 NM_022154:-138 ENST00000424970.6:-152 uc011ceo.2:-152 AK304274:-152 NM_001135147:-200 DQ892212:375 KJ894532:375 DQ895407:375 CU680230:375 ENST00000514000.5:-384 uc062yoa.1:-384 AF193052:-396 ENST00000356736.4:-421 uc003hwc.3:-421 BC012125:-421 ENST00000512657.5:-429 uc062yob.1:-429 NM_001135146:-445 | |all_trans=ENST00000394833.6:-86 uc003hwb.2:-86 AB040120:-86 NM_022154:-138 ENST00000424970.6:-152 uc011ceo.2:-152 AK304274:-152 NM_001135147:-200 DQ892212:375 KJ894532:375 DQ895407:375 CU680230:375 ENST00000514000.5:-384 uc062yoa.1:-384 AF193052:-396 ENST00000356736.4:-421 uc003hwc.3:-421 BC012125:-421 ENST00000512657.5:-429 uc062yob.1:-429 NM_001135146:-445 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=146 | |distance_to_tss=146 | ||
|end=102345053 | |end=102345053 | ||
| + | |end_of_center_position=102345045 | ||
|entrez_id=64116 | |entrez_id=64116 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=BIGM103 | + | |gene_alias=BIGM103 |
|gene_description=solute carrier family 39 member 8 | |gene_description=solute carrier family 39 member 8 | ||
|gene_id=64116 | |gene_id=64116 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=102345036 | |start=102345036 | ||
| + | |start_of_center_position=102345044 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000394833.6 uc003hwb.2 AB040120 | |transcript_name=ENST00000394833.6 uc003hwb.2 AB040120 | ||
Revision as of 20:45, 13 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 102345044 |
|---|---|
| End of the center position in the TSS region: | 102345045 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000394833.6 uc003hwb.2 AB040120 |
|---|---|
| Distance: | -86 |
| Num_trans: | 21 |
| All_trans: | ENST00000394833.6:-86 uc003hwb.2:-86 AB040120:-86 NM_022154:-138 ENST00000424970.6:-152 uc011ceo.2:-152 AK304274:-152 NM_001135147:-200 DQ892212:375 KJ894532:375 DQ895407:375 CU680230:375 ENST00000514000.5:-384 uc062yoa.1:-384 AF193052:-396 ENST00000356736.4:-421 uc003hwc.3:-421 BC012125:-421 ENST00000512657.5:-429 uc062yob.1:-429 NM_001135146:-445 |
TATA-Box annotation
| Distance to TSS: | 146 |
|---|---|
| Nearest PromoterID: | NM_022154 |
| Entrez ID: | 64116 |
| Nearest Unigene: | Hs.288034 |
| Nearest Refseq: | NM_022154 |
| Nearest Ensembl: | ENSG00000138821 |
| Gene Name: | solute carrier family 39 member 8 |
| Gene Alias: | BIGM103 |
| Gene Description: | solute carrier family 39 member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
