Difference between revisions of "TSS:Hg 53379.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000424970.6:0 uc011ceo.2:0 AK304274:0 NM_022154:8 NM_001135147:-39 ENST00000394833.6:60 uc003hwb.2:60 AB040120:60 ENST00000514000.5:-223 uc062yoa....") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CDG2N= | ||
| + | |LZT-Hs6= | ||
| + | |PP3105= | ||
| + | |ZIP8= | ||
|all_trans=ENST00000424970.6:0 uc011ceo.2:0 AK304274:0 NM_022154:8 NM_001135147:-39 ENST00000394833.6:60 uc003hwb.2:60 AB040120:60 ENST00000514000.5:-223 uc062yoa.1:-223 AF193052:-235 ENST00000356736.4:-260 uc003hwc.3:-260 BC012125:-260 ENST00000512657.5:-268 uc062yob.1:-268 NM_001135146:-284 | |all_trans=ENST00000424970.6:0 uc011ceo.2:0 AK304274:0 NM_022154:8 NM_001135147:-39 ENST00000394833.6:60 uc003hwb.2:60 AB040120:60 ENST00000514000.5:-223 uc062yoa.1:-223 AF193052:-235 ENST00000356736.4:-260 uc003hwc.3:-260 BC012125:-260 ENST00000512657.5:-268 uc062yob.1:-268 NM_001135146:-284 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-15 | |distance_to_tss=-15 | ||
|end=102345214 | |end=102345214 | ||
| + | |end_of_center_position=102345207 | ||
|entrez_id=64116 | |entrez_id=64116 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=BIGM103 | + | |gene_alias=BIGM103 |
|gene_description=solute carrier family 39 member 8 | |gene_description=solute carrier family 39 member 8 | ||
|gene_id=64116 | |gene_id=64116 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=102345198 | |start=102345198 | ||
| + | |start_of_center_position=102345206 | ||
|strand=- | |strand=- | ||
|tata_box="-70(CCCTTTAAACGC,+,0.00)" | |tata_box="-70(CCCTTTAAACGC,+,0.00)" | ||
Revision as of 20:45, 13 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 102345206 |
|---|---|
| End of the center position in the TSS region: | 102345207 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000424970.6 uc011ceo.2 AK304274 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000424970.6:0 uc011ceo.2:0 AK304274:0 NM_022154:8 NM_001135147:-39 ENST00000394833.6:60 uc003hwb.2:60 AB040120:60 ENST00000514000.5:-223 uc062yoa.1:-223 AF193052:-235 ENST00000356736.4:-260 uc003hwc.3:-260 BC012125:-260 ENST00000512657.5:-268 uc062yob.1:-268 NM_001135146:-284 |
TATA-Box annotation
| Distance to TSS: | -15 |
|---|---|
| Nearest PromoterID: | NM_022154 |
| Entrez ID: | 64116 |
| Nearest Unigene: | Hs.288034 |
| Nearest Refseq: | NM_022154 |
| Nearest Ensembl: | ENSG00000138821 |
| Gene Name: | solute carrier family 39 member 8 |
| Gene Alias: | BIGM103 |
| Gene Description: | solute carrier family 39 member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-70(CCCTTTAAACGC,+,0.00)" |
