Difference between revisions of "TSS:Hg 63797.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC040043:18 AK024640:-140 ENST00000523259.5:-147 ENST00000602875.5:-147 uc063hvk.1:-147 uc063hvl.1:-147 AF092038:-152 ENST00000602775.5:-157 NR_045587:-...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |SRAP= | ||
| + | |STRAA1= | ||
|all_trans=BC040043:18 AK024640:-140 ENST00000523259.5:-147 ENST00000602875.5:-147 uc063hvk.1:-147 uc063hvl.1:-147 AF092038:-152 ENST00000602775.5:-157 NR_045587:-157 NM_001253764:-157 uc063hvj.1:-157 BC067895:-157 BC156760:-189 BC152788:-189 AB590502:-189 ENST00000520427.1:-378 uc063hvm.1:-378 AF293024:-378 AF293025:-378 AF293026:-378 DQ286291:-378 | |all_trans=BC040043:18 AK024640:-140 ENST00000523259.5:-147 ENST00000602875.5:-147 uc063hvk.1:-147 uc063hvl.1:-147 AF092038:-152 ENST00000602775.5:-157 NR_045587:-157 NM_001253764:-157 uc063hvj.1:-157 BC067895:-157 BC156760:-189 BC152788:-189 AB590502:-189 ENST00000520427.1:-378 uc063hvm.1:-378 AF293024:-378 AF293025:-378 AF293026:-378 DQ286291:-378 | ||
|chr=chr5 | |chr=chr5 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=162 | |distance_to_tss=162 | ||
|end=140557299 | |end=140557299 | ||
| + | |end_of_center_position=140557295 | ||
|entrez_id=10011 | |entrez_id=10011 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=SRA | + | |gene_alias=SRA |
|gene_description=steroid receptor RNA activator 1 | |gene_description=steroid receptor RNA activator 1 | ||
|gene_id=10011 | |gene_id=10011 | ||
| Line 22: | Line 25: | ||
|nearest_unigene=Hs.653135 | |nearest_unigene=Hs.653135 | ||
|num_trans=21 | |num_trans=21 | ||
| + | |pp7684= | ||
|species=human | |species=human | ||
|start=140557289 | |start=140557289 | ||
| + | |start_of_center_position=140557294 | ||
|strand=- | |strand=- | ||
|transcript_name=BC040043 | |transcript_name=BC040043 | ||
Revision as of 10:33, 14 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 140557294 |
|---|---|
| End of the center position in the TSS region: | 140557295 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC040043 |
|---|---|
| Distance: | 18 |
| Num_trans: | 21 |
| All_trans: | BC040043:18 AK024640:-140 ENST00000523259.5:-147 ENST00000602875.5:-147 uc063hvk.1:-147 uc063hvl.1:-147 AF092038:-152 ENST00000602775.5:-157 NR_045587:-157 NM_001253764:-157 uc063hvj.1:-157 BC067895:-157 BC156760:-189 BC152788:-189 AB590502:-189 ENST00000520427.1:-378 uc063hvm.1:-378 AF293024:-378 AF293025:-378 AF293026:-378 DQ286291:-378 |
TATA-Box annotation
| Distance to TSS: | 162 |
|---|---|
| Nearest PromoterID: | NM_001253764 |
| Entrez ID: | 10011 |
| Nearest Unigene: | Hs.653135 |
| Nearest Refseq: | NM_001035235 |
| Nearest Ensembl: | ENSG00000213523 |
| Gene Name: | steroid receptor RNA activator 1 |
| Gene Alias: | SRA |
| Gene Description: | steroid receptor RNA activator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
