Difference between revisions of "TSS:Hg 241138.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000510197.5:461 NM_001242936:461 uc003hjv.4:461 AK124936:461 |chr=chr4 |cpg_percent=0.125 |distance=461 |distance_to_tss=324 |end=76213579 |entrez...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CD36L2= | ||
| + | |EPM4= | ||
| + | |HLGP85= | ||
| + | |LGP85= | ||
| + | |LIMP-2= | ||
| + | |LIMPII= | ||
| + | |SR-BII= | ||
|all_trans=ENST00000510197.5:461 NM_001242936:461 uc003hjv.4:461 AK124936:461 | |all_trans=ENST00000510197.5:461 NM_001242936:461 uc003hjv.4:461 AK124936:461 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 13: | ||
|distance_to_tss=324 | |distance_to_tss=324 | ||
|end=76213579 | |end=76213579 | ||
| + | |end_of_center_position=153723729 | ||
|entrez_id=950 | |entrez_id=950 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=AMRF | + | |gene_alias=AMRF |
|gene_description=scavenger receptor class B member 2 | |gene_description=scavenger receptor class B member 2 | ||
|gene_id=100129583 | |gene_id=100129583 | ||
| Line 24: | Line 32: | ||
|species=human | |species=human | ||
|start=76213571 | |start=76213571 | ||
| + | |start_of_center_position=153723728 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000510197.5 NM_001242936 uc003hjv.4 AK124936 | |transcript_name=ENST00000510197.5 NM_001242936 uc003hjv.4 AK124936 | ||
Revision as of 12:29, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 153723728 |
|---|---|
| End of the center position in the TSS region: | 153723729 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000510197.5 NM_001242936 uc003hjv.4 AK124936 |
|---|---|
| Distance: | 461 |
| Num_trans: | 4 |
| All_trans: | ENST00000510197.5:461 NM_001242936:461 uc003hjv.4:461 AK124936:461 |
TATA-Box annotation
| Distance to TSS: | 324 |
|---|---|
| Nearest PromoterID: | NM_005506 |
| Entrez ID: | 950 |
| Nearest Unigene: | Hs.349656 |
| Nearest Refseq: | NM_005506 |
| Nearest Ensembl: | ENSG00000138760 |
| Gene Name: | family with sequence similarity 47 member E |
| Gene Alias: | AMRF |
| Gene Description: | scavenger receptor class B member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
