Difference between revisions of "TSS:Hg 16794.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | | | + | |CGP-39= |
| + | |GP-39= | ||
| + | |GP39= | ||
| + | |HC-gp39= | ||
| + | |HCGP-3P= | ||
| + | |YKL-40= | ||
| + | |YKL40= | ||
| + | |YYL-40= | ||
| + | |all_trans=HGNC:1932 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=2 | |distance=2 | ||
| − | |distance_to_tss= | + | |distance_to_tss=3891 |
|end=203182819 | |end=203182819 | ||
| + | |end_of_center_position=203182813 | ||
|entrez_id=1116 | |entrez_id=1116 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=ASRT7 | + | |gene_alias=ASRT7{{!}}CGP-39{{!}}GP-39{{!}}GP39{{!}}HC-gp39{{!}}HCGP-3P{{!}}YK-40{{!}}YKL-40{{!}}YKL40{{!}}YYL-40{{!}}hCGP-39 |
|gene_description=chitinase 3 like 1 | |gene_description=chitinase 3 like 1 | ||
|gene_id=1116 | |gene_id=1116 | ||
| Line 14: | Line 23: | ||
|gene_source=HGNC:1932 | |gene_source=HGNC:1932 | ||
|gene_symbol=CHI3L1 | |gene_symbol=CHI3L1 | ||
| − | |gene_synonyms=GP39 YKL40 | + | |gene_synonyms=GP39 YK-40 YKL40 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCGP-39= | ||
|hgnc_mgi_id=HGNC:1932 | |hgnc_mgi_id=HGNC:1932 | ||
|nearest_ensembl=ENSG00000133048 | |nearest_ensembl=ENSG00000133048 | ||
| Line 21: | Line 31: | ||
|nearest_refseq=NM_001276 | |nearest_refseq=NM_001276 | ||
|nearest_unigene=Hs.382202 | |nearest_unigene=Hs.382202 | ||
| − | |num_trans= | + | |num_trans=1116 |
|species=human | |species=human | ||
|start=203182806 | |start=203182806 | ||
| + | |start_of_center_position=203182812 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000404436.2 | + | |transcript_name=ENST00000404436.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_16794.1 | |tss_id=hg_16794.1 | ||
Latest revision as of 18:13, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 203182812 |
|---|---|
| End of the center position in the TSS region: | 203182813 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000404436.2 |
|---|---|
| Distance: | 2 |
| Num_trans: | 1116 |
| All_trans: | HGNC:1932 |
TATA-Box annotation
| Distance to TSS: | 3891 |
|---|---|
| Nearest PromoterID: | NM_001276 |
| Entrez ID: | 1116 |
| Nearest Unigene: | Hs.382202 |
| Nearest Refseq: | NM_001276 |
| Nearest Ensembl: | ENSG00000133048 |
| Gene Name: | chitinase 3 like 1 |
| Gene Alias: | ASRT7|CGP-39|GP-39|GP39|HC-gp39|HCGP-3P|YK-40|YKL-40|YKL40|YYL-40|hCGP-39 |
| Gene Description: | chitinase 3 like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
