Difference between revisions of "TSS:Hg 152875.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:51945 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| − | |distance= | + | |distance=-105 |
|distance_to_tss=-105 | |distance_to_tss=-105 | ||
|end=14302408 | |end=14302408 | ||
| Line 12: | Line 12: | ||
|gene_description=MIR193B host gene | |gene_description=MIR193B host gene | ||
|gene_id=100129781 | |gene_id=100129781 | ||
| − | |gene_name= | + | |gene_name=MIR193b-365a host gene |
|gene_source=HGNC:51945 | |gene_source=HGNC:51945 | ||
|gene_symbol=MIR193BHG | |gene_symbol=MIR193BHG | ||
| − | |gene_synonyms= | + | |gene_synonyms=lincNORS |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:51945 | |hgnc_mgi_id=HGNC:51945 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_132983 | |nearest_refseq=NR_132983 | ||
|nearest_unigene=Hs.190748 | |nearest_unigene=Hs.190748 | ||
| − | |num_trans= | + | |num_trans= |
|species=human | |species=human | ||
|start=14302392 | |start=14302392 | ||
|start_of_center_position=14302400 | |start_of_center_position=14302400 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000641433.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_152875.1 | |tss_id=hg_152875.1 | ||
Latest revision as of 12:43, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 14302400 |
|---|---|
| End of the center position in the TSS region: | 14302401 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000641433.1 |
|---|---|
| Distance: | -105 |
| Num_trans: | |
| All_trans: | HGNC:51945 |
TATA-Box annotation
| Distance to TSS: | -105 |
|---|---|
| Nearest PromoterID: | NR_132984 |
| Entrez ID: | 100129781 |
| Nearest Unigene: | Hs.190748 |
| Nearest Refseq: | NR_132983 |
| Nearest Ensembl: | |
| Gene Name: | MIR193b-365a host gene |
| Gene Alias: | - |
| Gene Description: | MIR193B host gene |
| Gene Type: | ncRNA |
| CpG%: | 0.085 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
