Difference between revisions of "TSS:Hg 168698.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000612902.5:18 ENST00000572301.1:-21 ENST00000574041.5:-46 NR_164138:69 ENST00000570301.6:-160 NR_164137:-182 ENST00000572077.6:-207 ENST00000664998.1:-207 ENST00000664400.1:-237 ENST00000669395.1:-245 ENST00000648736.1:-264 ENST00000659293.1:-264 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=18 |
|distance_to_tss=-72 | |distance_to_tss=-72 | ||
|end=81385200 | |end=81385200 | ||
| + | |end_of_center_position=81385197 | ||
|entrez_id=100130370 | |entrez_id=100130370 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| Line 11: | Line 12: | ||
|gene_description=uncharacterized LOC100130370 | |gene_description=uncharacterized LOC100130370 | ||
|gene_id=100130370 | |gene_id=100130370 | ||
| − | |gene_name= | + | |gene_name=LOC100130370 |
|gene_source=EntrezGene:100130370 | |gene_source=EntrezGene:100130370 | ||
|gene_symbol=LOC100130370 | |gene_symbol=LOC100130370 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001272086 | |nearest_refseq=NM_001272086 | ||
|nearest_unigene=Hs.646594 | |nearest_unigene=Hs.646594 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=81385193 | |start=81385193 | ||
| + | |start_of_center_position=81385196 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000612902.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_168698.1 | |tss_id=hg_168698.1 | ||
Latest revision as of 18:39, 16 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 81385196 |
|---|---|
| End of the center position in the TSS region: | 81385197 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000612902.5 |
|---|---|
| Distance: | 18 |
| Num_trans: | 12 |
| All_trans: | ENST00000612902.5:18 ENST00000572301.1:-21 ENST00000574041.5:-46 NR_164138:69 ENST00000570301.6:-160 NR_164137:-182 ENST00000572077.6:-207 ENST00000664998.1:-207 ENST00000664400.1:-237 ENST00000669395.1:-245 ENST00000648736.1:-264 ENST00000659293.1:-264 |
TATA-Box annotation
| Distance to TSS: | -72 |
|---|---|
| Nearest PromoterID: | NM_001347841 |
| Entrez ID: | 100130370 |
| Nearest Unigene: | Hs.646594 |
| Nearest Refseq: | NM_001272086 |
| Nearest Ensembl: | |
| Gene Name: | LOC100130370 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100130370 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
