Difference between revisions of "TSS:Hg 154769.1"
From referenceTSS
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|HJMD= | |HJMD= | ||
|PCAD= | |PCAD= | ||
| − | |all_trans= | + | |all_trans=HGNC:1754 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-280 | |distance=-280 | ||
| − | |distance_to_tss= | + | |distance_to_tss=33245 |
|end=68678564 | |end=68678564 | ||
|end_of_center_position=68678556 | |end_of_center_position=68678556 | ||
|entrez_id=1001 | |entrez_id=1001 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias=CDHP | + | |gene_alias=CDHP{{!}}HJMD{{!}}PCAD |
|gene_description=cadherin 3 | |gene_description=cadherin 3 | ||
|gene_id=1001 | |gene_id=1001 | ||
| − | |gene_name=cadherin 15 | + | |gene_name=cadherin 15 |
| − | |gene_source=HGNC:1754 | + | |gene_source=HGNC:1754 |
| − | |gene_symbol=CDH15 | + | |gene_symbol=CDH15 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC:1754 | + | |hgnc_mgi_id=HGNC:1754 |
|nearest_ensembl=ENSG00000062038 | |nearest_ensembl=ENSG00000062038 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001793 |
|nearest_refseq=NM_001793 | |nearest_refseq=NM_001793 | ||
|nearest_unigene=Hs.191842 | |nearest_unigene=Hs.191842 | ||
| − | |num_trans= | + | |num_trans=1001 |
|species=human | |species=human | ||
|start=68678546 | |start=68678546 | ||
|start_of_center_position=68678555 | |start_of_center_position=68678555 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000569036.2 | + | |transcript_name=ENST00000569036.2 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_154769.1 | |tss_id=hg_154769.1 | ||
Latest revision as of 13:24, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 68678555 |
|---|---|
| End of the center position in the TSS region: | 68678556 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000569036.2 |
|---|---|
| Distance: | -280 |
| Num_trans: | 1001 |
| All_trans: | HGNC:1754 |
TATA-Box annotation
| Distance to TSS: | 33245 |
|---|---|
| Nearest PromoterID: | NM_001793 |
| Entrez ID: | 1001 |
| Nearest Unigene: | Hs.191842 |
| Nearest Refseq: | NM_001793 |
| Nearest Ensembl: | ENSG00000062038 |
| Gene Name: | cadherin 15 |
| Gene Alias: | CDHP|HJMD|PCAD |
| Gene Description: | cadherin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
