Difference between revisions of "TSS:Hg 82389.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GCS1L= | |GCS1L= | ||
| − | |all_trans= | + | |all_trans=HGNC:16486 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 10: | Line 10: | ||
|entrez_id=11033 | |entrez_id=11033 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=CENTA1 | + | |gene_alias=CENTA1{{!}}GCS1L{{!}}p42IP4 |
|gene_description=ArfGAP with dual PH domains 1 | |gene_description=ArfGAP with dual PH domains 1 | ||
|gene_id=11033 | |gene_id=11033 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_006869 | |nearest_refseq=NM_006869 | ||
|nearest_unigene=Hs.602573 | |nearest_unigene=Hs.602573 | ||
| − | |num_trans= | + | |num_trans=11033 |
|p42IP4= | |p42IP4= | ||
|species=human | |species=human | ||
| Line 29: | Line 29: | ||
|start_of_center_position=927495 | |start_of_center_position=927495 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000453823.5 | + | |transcript_name=ENST00000453823.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_82389.1 | |tss_id=hg_82389.1 | ||
Latest revision as of 12:21, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 927495 |
|---|---|
| End of the center position in the TSS region: | 927496 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000453823.5 |
|---|---|
| Distance: | -10 |
| Num_trans: | 11033 |
| All_trans: | HGNC:16486 |
TATA-Box annotation
| Distance to TSS: | -280 |
|---|---|
| Nearest PromoterID: | NM_001284310 |
| Entrez ID: | 11033 |
| Nearest Unigene: | Hs.602573 |
| Nearest Refseq: | NM_006869 |
| Nearest Ensembl: | ENSG00000105963 |
| Gene Name: | ArfGAP with dual PH domains 1 |
| Gene Alias: | CENTA1|GCS1L|p42IP4 |
| Gene Description: | ArfGAP with dual PH domains 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
