Personal tools

Difference between revisions of "TSS:Hg 167048.1"

From referenceTSS

Jump to: navigation, search
 
(One intermediate revision by the same user not shown)
Line 2: Line 2:
 
|CARPX=
 
|CARPX=
 
|HUCEP-15=
 
|HUCEP-15=
|all_trans=AK294652:-13 AK313001:-31 AY358509:220 ENST00000571371.5:223 ENST00000573294.1:223 uc060hpl.1:223 uc060hpr.1:223 CR749607:223 BC047456:-369 ENST00000451037.6:-411 uc002itw.5:-411 BC068462:-411 CR936674:-449 NM_020178:-456 AL161812:498 JF432658:499 KJ894363:499 AB001597:500 AB529209:500
+
|all_trans=HGNC:1369
 
|chr=chr17
 
|chr=chr17
 
|cpg_percent=0.1
 
|cpg_percent=0.1
 
|distance=-13
 
|distance=-13
|distance_to_tss=471
+
|distance_to_tss=413
 
|end=52158316
 
|end=52158316
 
|end_of_center_position=52158301
 
|end_of_center_position=52158301
 
|entrez_id=56934
 
|entrez_id=56934
 
|gc_percent=0.706468
 
|gc_percent=0.706468
|gene_alias=CA-RPX
+
|gene_alias=CA-RPX{{!}}CARPX{{!}}HUCEP-15
 
|gene_description=carbonic anhydrase 10
 
|gene_description=carbonic anhydrase 10
 
|gene_id=56934
 
|gene_id=56934
Line 24: Line 24:
 
|nearest_refseq=NM_020178
 
|nearest_refseq=NM_020178
 
|nearest_unigene=Hs.463466
 
|nearest_unigene=Hs.463466
|num_trans=19
+
|num_trans=56934
 
|species=human
 
|species=human
 
|start=52158285
 
|start=52158285

Latest revision as of 17:54, 20 July 2021

Basic information about the TSS


TSS ID:hg_167048.1
Species:human
Chr:chr17
TSS Classification:yes
Start:52158285
End:52158316
Strand:-
TSS Score:1
Start of the center position in the TSS region:52158300
End of the center position in the TSS region:52158301



Gene and protein annotation


Transcript_name:AK294652
Distance:-13
GeneID:56934
HGNC/MGI_ID:HGNC:1369
UniProt_ID:
Gene_name:carbonic anhydrase 10
Gene_symbol:CA10
Gene_synonyms:CA-RPX CARPX HUCEP-15
Gene_source:HGNC:1369



Transcript annotation


Transcript_name:AK294652
Distance:-13
Num_trans:56934
All_trans:HGNC:1369



TATA-Box annotation


Distance to TSS:413
Nearest PromoterID:NM_020178
Entrez ID:56934
Nearest Unigene:Hs.463466
Nearest Refseq:NM_020178
Nearest Ensembl:ENSG00000154975
Gene Name:carbonic anhydrase 10
Gene Alias:CA-RPX|CARPX|HUCEP-15
Gene Description:carbonic anhydrase 10
Gene Type:protein-coding
CpG%:0.1
GC%:0.706468
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):