Difference between revisions of "TSS:Hg 242376.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:9253 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| − | |distance= | + | |distance=-10 |
|distance_to_tss=-1 | |distance_to_tss=-1 | ||
| − | |end= | + | |end=44796652 |
|end_of_center_position=44796649 | |end_of_center_position=44796649 | ||
|entrez_id=100271927 | |entrez_id=100271927 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=RAS p21 protein activator 4B | |gene_description=RAS p21 protein activator 4B | ||
| − | |gene_id= | + | |gene_id=5478 |
| − | |gene_name= | + | |gene_name=peptidylprolyl isomerase A |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:9253 |
| − | |gene_symbol= | + | |gene_symbol=PPIA |
| − | |gene_synonyms= | + | |gene_synonyms=CYPA |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:9253 |
|nearest_ensembl=ENSG00000170667 | |nearest_ensembl=ENSG00000170667 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001367767 |
|nearest_refseq=NM_001277335 | |nearest_refseq=NM_001277335 | ||
|nearest_unigene=Hs.530089 | |nearest_unigene=Hs.530089 | ||
| − | |num_trans= | + | |num_trans=5478 |
|species=human | |species=human | ||
| − | |start= | + | |start=44796645 |
|start_of_center_position=44796648 | |start_of_center_position=44796648 | ||
| − | |strand= | + | |strand=+ |
| − | |transcript_name= | + | |transcript_name=BC137057 BC137058 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_242376.1 | |tss_id=hg_242376.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 14:46, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 44796648 |
|---|---|
| End of the center position in the TSS region: | 44796649 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC137057 BC137058 |
|---|---|
| Distance: | -10 |
| Num_trans: | 5478 |
| All_trans: | HGNC:9253 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001367767 |
| Entrez ID: | 100271927 |
| Nearest Unigene: | Hs.530089 |
| Nearest Refseq: | NM_001277335 |
| Nearest Ensembl: | ENSG00000170667 |
| Gene Name: | peptidylprolyl isomerase A |
| Gene Alias: | - |
| Gene Description: | RAS p21 protein activator 4B |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
