Difference between revisions of "TSS:Hg 167961.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|CD300Hs= | |CD300Hs= | ||
| − | |all_trans= | + | |all_trans=ENST00000641710.1:158 ENST00000641031.1:158 NM_001324076:158 NM_001324073:158 LC013475:158 LC013476:158 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-165 | |distance_to_tss=-165 | ||
|end=74567515 | |end=74567515 | ||
| Line 10: | Line 10: | ||
|entrez_id=100130520 | |entrez_id=100130520 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias= | + | |gene_alias=CD300Hs |
| − | |gene_description= | + | |gene_description=CD300H molecule (gene/pseudogene) |
|gene_id=100130520 | |gene_id=100130520 | ||
| − | |gene_name= | + | |gene_name=CD300H molecule (gene/pseudogene) |
| − | |gene_source= | + | |gene_source=HGNC:52292 |
| − | |gene_symbol= | + | |gene_symbol=CD300H |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:52292 |
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000284690 |
|nearest_promoter_id=NM_001324076 | |nearest_promoter_id=NM_001324076 | ||
|nearest_refseq=NM_001324073 | |nearest_refseq=NM_001324073 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=74567500 | |start=74567500 | ||
|start_of_center_position=74567507 | |start_of_center_position=74567507 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001324073.2 NM_001324076.2 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_167961.1 | |tss_id=hg_167961.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A0K2S4Q6 | + | |uniprot_id=A0A0K2S4Q6 A0A286YF48 |
}} | }} | ||
Latest revision as of 18:14, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74567507 |
|---|---|
| End of the center position in the TSS region: | 74567508 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001324073.2 NM_001324076.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000641710.1:158 ENST00000641031.1:158 NM_001324076:158 NM_001324073:158 LC013475:158 LC013476:158 |
TATA-Box annotation
| Distance to TSS: | -165 |
|---|---|
| Nearest PromoterID: | NM_001324076 |
| Entrez ID: | 100130520 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001324073 |
| Nearest Ensembl: | ENSG00000284690 |
| Gene Name: | CD300H molecule (gene/pseudogene) |
| Gene Alias: | CD300Hs |
| Gene Description: | CD300H molecule (gene/pseudogene) |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
