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Difference between revisions of "TSS:Hg 162763.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000556126.2:0 uc060kah.1:0 ENST00000579469.1:173 uc002joy.4:173 NM_001162997:302 BC062771:302 AK131023:375
+
|all_trans=HGNC:40032
 
|chr=chr17
 
|chr=chr17
 
|cpg_percent=0.025
 
|cpg_percent=0.025
 
|distance=0
 
|distance=0
|distance_to_tss=-316
+
|distance_to_tss=-1
 
|end=75646264
 
|end=75646264
 
|end_of_center_position=75646250
 
|end_of_center_position=75646250
 
|entrez_id=100130933
 
|entrez_id=100130933
 
|gc_percent=0.621891
 
|gc_percent=0.621891
|gene_alias=C17orf110
+
|gene_alias=C17orf110{{!}}ELN
 
|gene_description=small integral membrane protein 6
 
|gene_description=small integral membrane protein 6
 
|gene_id=100130933
 
|gene_id=100130933
Line 15: Line 15:
 
|gene_source=HGNC:40032
 
|gene_source=HGNC:40032
 
|gene_symbol=SMIM6
 
|gene_symbol=SMIM6
|gene_synonyms=
+
|gene_synonyms=ELN
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 
|hgnc_mgi_id=HGNC:40032
 
|hgnc_mgi_id=HGNC:40032
Line 22: Line 22:
 
|nearest_refseq=NM_001162997
 
|nearest_refseq=NM_001162997
 
|nearest_unigene=Hs.662541
 
|nearest_unigene=Hs.662541
|num_trans=7
+
|num_trans=100130933
 
|species=human
 
|species=human
 
|start=75646235
 
|start=75646235
 
|start_of_center_position=75646249
 
|start_of_center_position=75646249
 
|strand=+
 
|strand=+
|transcript_name=ENST00000556126.2 uc060kah.1
+
|transcript_name=ENST00000556126.2 ENST00000579469.2
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_162763.1
 
|tss_id=hg_162763.1

Latest revision as of 16:19, 20 July 2021

Basic information about the TSS


TSS ID:hg_162763.1
Species:human
Chr:chr17
TSS Classification:yes
Start:75646235
End:75646264
Strand:+
TSS Score:1
Start of the center position in the TSS region:75646249
End of the center position in the TSS region:75646250



Gene and protein annotation


Transcript_name:ENST00000556126.2 ENST00000579469.2
Distance:0
GeneID:100130933
HGNC/MGI_ID:HGNC:40032
UniProt_ID:P0DI80
Gene_name:small integral membrane protein 6
Gene_symbol:SMIM6
Gene_synonyms:ELN
Gene_source:HGNC:40032



Transcript annotation


Transcript_name:ENST00000556126.2 ENST00000579469.2
Distance:0
Num_trans:100130933
All_trans:HGNC:40032



TATA-Box annotation


Distance to TSS:-1
Nearest PromoterID:NM_001162997
Entrez ID:100130933
Nearest Unigene:Hs.662541
Nearest Refseq:NM_001162997
Nearest Ensembl:ENSG00000259120
Gene Name:small integral membrane protein 6
Gene Alias:C17orf110|ELN
Gene Description:small integral membrane protein 6
Gene Type:protein-coding
CpG%:0.025
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):