Difference between revisions of "TSS:Hg 169172.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|TGIF= | |TGIF= | ||
| − | |all_trans=ENST00000549780.5 | + | |all_trans=NM_001374396:96 ENST00000549780.5:164 |
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=96 |
| − | |distance_to_tss= | + | |distance_to_tss=784 |
|end=3448335 | |end=3448335 | ||
|end_of_center_position=3448326 | |end_of_center_position=3448326 | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4{{!}}TGIF |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=3448325 | |start_of_center_position=3448325 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001374396.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_169172.1 | |tss_id=hg_169172.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 18:40, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3448325 |
|---|---|
| End of the center position in the TSS region: | 3448326 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001374396.1 |
|---|---|
| Distance: | 96 |
| Num_trans: | 2 |
| All_trans: | NM_001374396:96 ENST00000549780.5:164 |
TATA-Box annotation
| Distance to TSS: | 784 |
|---|---|
| Nearest PromoterID: | NM_173207 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4|TGIF |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
