Difference between revisions of "TSS:Hg 100744.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:23683 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance_to_tss=- | + | |distance=40 |
| + | |distance_to_tss=-13605 | ||
| + | |end=37637366 | ||
| + | |end_of_center_position=37637350 | ||
|entrez_id=22844 | |entrez_id=22844 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
|gene_alias=FRMD2 | |gene_alias=FRMD2 | ||
|gene_description=FERM and PDZ domain containing 1 | |gene_description=FERM and PDZ domain containing 1 | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=RAB1C, member RAS oncogene family pseudogene | ||
| + | |gene_source=HGNC:23683 | ||
| + | |gene_symbol=RAB1C | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23683 | ||
|nearest_ensembl=ENSG00000070601 | |nearest_ensembl=ENSG00000070601 | ||
|nearest_promoter_id=NM_014907 | |nearest_promoter_id=NM_014907 | ||
|nearest_refseq=NM_014907 | |nearest_refseq=NM_014907 | ||
|nearest_unigene=Hs.163990 | |nearest_unigene=Hs.163990 | ||
| + | |num_trans= | ||
| + | |species=human | ||
| + | |start=37637332 | ||
| + | |start_of_center_position=37637349 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000409159.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100744.1 | |tss_id=hg_100744.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:50, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 37637349 |
|---|---|
| End of the center position in the TSS region: | 37637350 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000409159.2 |
|---|---|
| Distance: | 40 |
| Num_trans: | |
| All_trans: | HGNC:23683 |
TATA-Box annotation
| Distance to TSS: | -13605 |
|---|---|
| Nearest PromoterID: | NM_014907 |
| Entrez ID: | 22844 |
| Nearest Unigene: | Hs.163990 |
| Nearest Refseq: | NM_014907 |
| Nearest Ensembl: | ENSG00000070601 |
| Gene Name: | RAB1C, member RAS oncogene family pseudogene |
| Gene Alias: | FRMD2 |
| Gene Description: | FERM and PDZ domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
