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Difference between revisions of "TSS:Hg 100122.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000418777.5:53 ENST00000468187.6:53 LF355575:67 MA591152:67 ENST00000603713.5:-102 DQ884944:-102 AY438376:139 ENST00000603313.5:-151
+
|all_trans=HGNC:30988
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.005
 
|cpg_percent=0.005
Line 22: Line 22:
 
|nearest_refseq=NR_151723
 
|nearest_refseq=NR_151723
 
|nearest_unigene=Hs.609218
 
|nearest_unigene=Hs.609218
|num_trans=8
+
|num_trans=54796
 
|species=human
 
|species=human
 
|start=16728049
 
|start=16728049

Latest revision as of 17:36, 19 July 2021

Basic information about the TSS


TSS ID:hg_100122.1
Species:human
Chr:chr9
TSS Classification:yes
Start:16728049
End:16728063
Strand:-
TSS Score:1
Start of the center position in the TSS region:16728056
End of the center position in the TSS region:16728057



Gene and protein annotation


Transcript_name:ENST00000418777.5 ENST00000468187.6
Distance:53
GeneID:54796
HGNC/MGI_ID:HGNC:30988
UniProt_ID:H0Y6W5 S4R3K9
Gene_name:basonuclin 2
Gene_symbol:BNC2
Gene_synonyms:BSN2 FLJ20043
Gene_source:HGNC:30988



Transcript annotation


Transcript_name:ENST00000418777.5 ENST00000468187.6
Distance:53
Num_trans:54796
All_trans:HGNC:30988



TATA-Box annotation


Distance to TSS:1242
Nearest PromoterID:NR_151723
Entrez ID:111216284
Nearest Unigene:Hs.609218
Nearest Refseq:NR_151723
Nearest Ensembl:ENSG00000234779
Gene Name:basonuclin 2
Gene Alias:-
Gene Description:BNC2 antisense RNA 1
Gene Type:ncRNA
CpG%:0.005
GC%:0.497512
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):