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Difference between revisions of "TSS:Hg 100442.1"

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Line 4: Line 4:
 
|GT1=
 
|GT1=
 
|GTB=
 
|GTB=
|all_trans=M22921:22 U10474:22 D29805:25 X13223:25 X14085:25 HG765099:55 HG765101:55 AK312797:61 ENST00000379731.5:-68 NM_001378497:-68 NM_001497:-68 NM_001378496:-68 AK296928:72 ENST00000535206.5:-88 BC045773:-88 KJ901453:89 X55415:89 AB590749:89 NM_001378495:99 AK316294:110 U10473:433
+
|all_trans=HGNC:924
 
|beta4Gal-T1=
 
|beta4Gal-T1=
 
|chr=chr9
 
|chr=chr9
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|entrez_id=2683
 
|entrez_id=2683
 
|gc_percent=0.761194
 
|gc_percent=0.761194
|gene_alias=B4GAL-T1|CDG2D|GGTB2|GT1|GTB|beta4Gal-T1
+
|gene_alias=B4GAL-T1{{!}}CDG2D{{!}}GGTB2{{!}}GT1{{!}}GTB{{!}}beta4Gal-T1
 
|gene_description=beta-1,4-galactosyltransferase 1
 
|gene_description=beta-1,4-galactosyltransferase 1
 
|gene_id=2683
 
|gene_id=2683
Line 27: Line 27:
 
|nearest_refseq=NM_001497
 
|nearest_refseq=NM_001497
 
|nearest_unigene=Hs.272011
 
|nearest_unigene=Hs.272011
|num_trans=21
+
|num_trans=2683
 
|species=human
 
|species=human
 
|start=33167257
 
|start=33167257

Latest revision as of 17:43, 19 July 2021

Basic information about the TSS


TSS ID:hg_100442.1
Species:human
Chr:chr9
TSS Classification:yes
Start:33167257
End:33167268
Strand:-
TSS Score:1
Start of the center position in the TSS region:33167262
End of the center position in the TSS region:33167263



Gene and protein annotation


Transcript_name:M22921 U10474
Distance:22
GeneID:2683
HGNC/MGI_ID:HGNC:924
UniProt_ID:
Gene_name:beta-1,4-galactosyltransferase 1
Gene_symbol:B4GALT1
Gene_synonyms:beta4Gal-T1
Gene_source:HGNC:924



Transcript annotation


Transcript_name:M22921 U10474
Distance:22
Num_trans:2683
All_trans:HGNC:924



TATA-Box annotation


Distance to TSS:95
Nearest PromoterID:NM_001497
Entrez ID:2683
Nearest Unigene:Hs.272011
Nearest Refseq:NM_001497
Nearest Ensembl:ENSG00000086062
Gene Name:beta-1,4-galactosyltransferase 1
Gene Alias:B4GAL-T1|CDG2D|GGTB2|GT1|GTB|beta4Gal-T1
Gene Description:beta-1,4-galactosyltransferase 1
Gene Type:protein-coding
CpG%:0.12
GC%:0.761194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):71(CTTCTTAAAGCG,+,0.00)