Personal tools

Difference between revisions of "TSS:Hg 10053.1"

From referenceTSS

Jump to: navigation, search
 
(One intermediate revision by the same user not shown)
Line 4: Line 4:
 
|Syx=
 
|Syx=
 
|Tech=
 
|Tech=
|all_trans=ENST00000400915.8:252 NM_001042663:264 AB018263:264 AK125550:286 NM_001265592:445
+
|all_trans=HGNC:29105
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 13: Line 13:
 
|entrez_id=57449
 
|entrez_id=57449
 
|gc_percent=0.721393
 
|gc_percent=0.721393
|gene_alias=CMTRIC|DSMA4|GEF720|Syx|Tech
+
|gene_alias=CMTRIC{{!}}DSMA4{{!}}GEF720{{!}}Syx{{!}}Tech
 
|gene_description=pleckstrin homology and RhoGEF domain containing G5
 
|gene_description=pleckstrin homology and RhoGEF domain containing G5
 
|gene_id=57449
 
|gene_id=57449
Line 26: Line 26:
 
|nearest_refseq=NM_020631
 
|nearest_refseq=NM_020631
 
|nearest_unigene=Hs.284232
 
|nearest_unigene=Hs.284232
|num_trans=5
+
|num_trans=57449
 
|species=human
 
|species=human
 
|start=6497675
 
|start=6497675

Latest revision as of 17:45, 19 July 2021

Basic information about the TSS


TSS ID:hg_10053.1
Species:human
Chr:chr1
TSS Classification:yes
Start:6497675
End:6497689
Strand:-
TSS Score:1
Start of the center position in the TSS region:6497682
End of the center position in the TSS region:6497683



Gene and protein annotation


Transcript_name:ENST00000400915.8
Distance:252
GeneID:57449
HGNC/MGI_ID:HGNC:29105
UniProt_ID:O94827
Gene_name:pleckstrin homology and RhoGEF domain containing G5
Gene_symbol:PLEKHG5
Gene_synonyms:GEF720 KIAA0720 Syx Tech
Gene_source:HGNC:29105



Transcript annotation


Transcript_name:ENST00000400915.8
Distance:252
Num_trans:57449
All_trans:HGNC:29105



TATA-Box annotation


Distance to TSS:-238
Nearest PromoterID:NM_001042663
Entrez ID:57449
Nearest Unigene:Hs.284232
Nearest Refseq:NM_020631
Nearest Ensembl:ENSG00000171680
Gene Name:pleckstrin homology and RhoGEF domain containing G5
Gene Alias:CMTRIC|DSMA4|GEF720|Syx|Tech
Gene Description:pleckstrin homology and RhoGEF domain containing G5
Gene Type:protein-coding
CpG%:0.09
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):