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Difference between revisions of "TSS:Hg 100573.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000378561.5:-10 AB040972:-10 ENST00000603301.5:-24 NM_001317991:91 ENST00000378557.1:120 AL583909:169 LF354330:226 MA589907:226 LF354329:467 MA589906:467
+
|all_trans=HGNC:25666
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.13
 
|cpg_percent=0.13
Line 22: Line 22:
 
|nearest_refseq=NM_025182
 
|nearest_refseq=NM_025182
 
|nearest_unigene=Hs.301696
 
|nearest_unigene=Hs.301696
|num_trans=10
+
|num_trans=80256
 
|species=human
 
|species=human
 
|start=35111542
 
|start=35111542

Latest revision as of 17:46, 19 July 2021

Basic information about the TSS


TSS ID:hg_100573.1
Species:human
Chr:chr9
TSS Classification:yes
Start:35111542
End:35111564
Strand:-
TSS Score:1
Start of the center position in the TSS region:35111553
End of the center position in the TSS region:35111554



Gene and protein annotation


Transcript_name:ENST00000378561.5 AB040972
Distance:-10
GeneID:80256
HGNC/MGI_ID:HGNC:25666
UniProt_ID:Q7L5A3
Gene_name:family with sequence similarity 214 member B
Gene_symbol:FAM214B
Gene_synonyms:FLJ11560 bA182N22.6
Gene_source:HGNC:25666



Transcript annotation


Transcript_name:ENST00000378561.5 AB040972
Distance:-10
Num_trans:80256
All_trans:HGNC:25666



TATA-Box annotation


Distance to TSS:-101
Nearest PromoterID:NM_001317991
Entrez ID:80256
Nearest Unigene:Hs.301696
Nearest Refseq:NM_025182
Nearest Ensembl:ENSG00000005238
Gene Name:family with sequence similarity 214 member B
Gene Alias:KIAA1539
Gene Description:family with sequence similarity 214 member B
Gene Type:protein-coding
CpG%:0.13
GC%:0.81592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):