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Difference between revisions of "TSS:Hg 100895.1"

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Line 2: Line 2:
 
|LTRPC3=
 
|LTRPC3=
 
|MLSN2=
 
|MLSN2=
|all_trans=AK308682:76 ENST00000377110.9:-84 ENST00000377111.8:-84 AJ505026:-84 AJ505025:-84 ENST00000677713.2:-107 NM_001007471:-107 NM_001366148:-107 NM_001366147:-107 NM_001366152:-107 NM_001366151:-107 NM_001366145:-107 NM_001366146:-107 NM_001366149:-107 NM_001366150:-107 NM_001366153:-107 BC172350:148
+
|all_trans=HGNC:17992
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 11: Line 11:
 
|entrez_id=80036
 
|entrez_id=80036
 
|gc_percent=0.547264
 
|gc_percent=0.547264
|gene_alias=GON-2|LTRPC3|MLSN2
+
|gene_alias=GON-2{{!}}LTRPC3{{!}}MLSN2
 
|gene_description=transient receptor potential cation channel subfamily M member 3
 
|gene_description=transient receptor potential cation channel subfamily M member 3
 
|gene_id=80036
 
|gene_id=80036
Line 24: Line 24:
 
|nearest_refseq=NM_020952
 
|nearest_refseq=NM_020952
 
|nearest_unigene=Hs.47288
 
|nearest_unigene=Hs.47288
|num_trans=17
+
|num_trans=80036
 
|species=human
 
|species=human
 
|start=71121501
 
|start=71121501

Latest revision as of 17:53, 19 July 2021

Basic information about the TSS


TSS ID:hg_100895.1
Species:human
Chr:chr9
TSS Classification:yes
Start:71121501
End:71121514
Strand:-
TSS Score:1
Start of the center position in the TSS region:71121507
End of the center position in the TSS region:71121508



Gene and protein annotation


Transcript_name:AK308682
Distance:76
GeneID:80036
HGNC/MGI_ID:HGNC:17992
UniProt_ID:
Gene_name:transient receptor potential cation channel subfamily M member 3
Gene_symbol:TRPM3
Gene_synonyms:GON-2 KIAA1616 LTRPC3
Gene_source:HGNC:17992



Transcript annotation


Transcript_name:AK308682
Distance:76
Num_trans:80036
All_trans:HGNC:17992



TATA-Box annotation


Distance to TSS:113
Nearest PromoterID:NM_001366150
Entrez ID:80036
Nearest Unigene:Hs.47288
Nearest Refseq:NM_020952
Nearest Ensembl:ENSG00000083067
Gene Name:transient receptor potential cation channel subfamily M member 3
Gene Alias:GON-2|LTRPC3|MLSN2
Gene Description:transient receptor potential cation channel subfamily M member 3
Gene Type:protein-coding
CpG%:0.02
GC%:0.547264
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):