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Difference between revisions of "TSS:Hg 101049.1"

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Line 3: Line 3:
 
|C9orf65=
 
|C9orf65=
 
|KIAA0367=
 
|KIAA0367=
|all_trans=ENST00000488346.5:-26 ENST00000376717.6:-52 AK299857:-55 AK298805:-56 AK296269:-56 ENST00000466266.6:-59 ENST00000223609.10:-59 BC022571:-59 NM_001330680:-274 NM_001308050:-274 NM_001308049:-274 NM_001308051:-274
+
|all_trans=HGNC:25209
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 12: Line 12:
 
|entrez_id=158471
 
|entrez_id=158471
 
|gc_percent=0.487562
 
|gc_percent=0.487562
|gene_alias=BMCC1|BNIPXL|C9orf65|KIAA0367
+
|gene_alias=BMCC1{{!}}BNIPXL{{!}}C9orf65{{!}}KIAA0367
 
|gene_description=prune homolog 2 with BCH domain
 
|gene_description=prune homolog 2 with BCH domain
 
|gene_id=158471
 
|gene_id=158471
Line 25: Line 25:
 
|nearest_refseq=NM_015225
 
|nearest_refseq=NM_015225
 
|nearest_unigene=Hs.262857
 
|nearest_unigene=Hs.262857
|num_trans=12
+
|num_trans=158471
 
|species=human
 
|species=human
 
|start=76692136
 
|start=76692136

Latest revision as of 17:56, 19 July 2021

Basic information about the TSS


TSS ID:hg_101049.1
Species:human
Chr:chr9
TSS Classification:yes
Start:76692136
End:76692141
Strand:-
TSS Score:1
Start of the center position in the TSS region:76692138
End of the center position in the TSS region:76692139



Gene and protein annotation


Transcript_name:ENST00000488346.5
Distance:-26
GeneID:158471
HGNC/MGI_ID:HGNC:25209
UniProt_ID:
Gene_name:prune homolog 2 with BCH domain
Gene_symbol:PRUNE2
Gene_synonyms:A214N16.3 BMCC1 BNIPXL bA214N16.3
Gene_source:HGNC:25209



Transcript annotation


Transcript_name:ENST00000488346.5
Distance:-26
Num_trans:158471
All_trans:HGNC:25209



TATA-Box annotation


Distance to TSS:276
Nearest PromoterID:NM_001308049
Entrez ID:158471
Nearest Unigene:Hs.262857
Nearest Refseq:NM_015225
Nearest Ensembl:ENSG00000106772
Gene Name:prune homolog 2 with BCH domain
Gene Alias:BMCC1|BNIPXL|C9orf65|KIAA0367
Gene Description:prune homolog 2 with BCH domain
Gene Type:protein-coding
CpG%:0.02
GC%:0.487562
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):