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Difference between revisions of "TSS:Hg 100506.1"

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Line 2: Line 2:
 
|NYD-SP22=
 
|NYD-SP22=
 
|SMRP1=
 
|SMRP1=
|all_trans=ENST00000379124.5:-7 ENST00000379126.7:-14 AK225981:14 AF367474:-14 ENST00000379127.1:-36 NM_147169:-65 NM_001252195:-65 NM_147168:-65 AK094751:-65 ENST00000379133.7:-76
+
|all_trans=HGNC:19919
 
|bA573M23.4=
 
|bA573M23.4=
 
|chr=chr9
 
|chr=chr9
Line 25: Line 25:
 
|nearest_refseq=NM_032596
 
|nearest_refseq=NM_032596
 
|nearest_unigene=Hs.50334
 
|nearest_unigene=Hs.50334
|num_trans=10
+
|num_trans=84688
 
|species=human
 
|species=human
 
|start=34381513
 
|start=34381513

Latest revision as of 17:44, 19 July 2021

Basic information about the TSS


TSS ID:hg_100506.1
Species:human
Chr:chr9
TSS Classification:yes
Start:34381513
End:34381524
Strand:-
TSS Score:1
Start of the center position in the TSS region:34381518
End of the center position in the TSS region:34381519



Gene and protein annotation


Transcript_name:ENST00000379124.5
Distance:-7
GeneID:84688
HGNC/MGI_ID:HGNC:19919
UniProt_ID:Q8NCR6
Gene_name:chromosome 9 open reading frame 24
Gene_symbol:C9orf24
Gene_synonyms:CBE1 MGC32921 MGC33614 NYD-SP22 SMRP1 bA573M23.4
Gene_source:HGNC:19919



Transcript annotation


Transcript_name:ENST00000379124.5
Distance:-7
Num_trans:84688
All_trans:HGNC:19919



TATA-Box annotation


Distance to TSS:70
Nearest PromoterID:NM_001252195
Entrez ID:84688
Nearest Unigene:Hs.50334
Nearest Refseq:NM_032596
Nearest Ensembl:ENSG00000164972
Gene Name:chromosome 9 open reading frame 24
Gene Alias:CBE1|NYD-SP22|SMRP1|bA573M23.4
Gene Description:chromosome 9 open reading frame 24
Gene Type:protein-coding
CpG%:0.045
GC%:0.61194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):13(ACCCCTAAAAGG,-,0.00)