Personal tools

Difference between revisions of "TSS:Hg 101050.1"

From referenceTSS

Jump to: navigation, search
 
Line 3: Line 3:
 
|C9orf65=
 
|C9orf65=
 
|KIAA0367=
 
|KIAA0367=
|all_trans=ENST00000488346.5:-12 ENST00000376717.6:-38 AK299857:-41 AK298805:-42 AK296269:-42 ENST00000466266.6:-45 ENST00000223609.10:-45 BC022571:-45 NM_001330680:-260 NM_001308050:-260 NM_001308049:-260 NM_001308051:-260
+
|all_trans=HGNC:25209
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 25: Line 25:
 
|nearest_refseq=NM_015225
 
|nearest_refseq=NM_015225
 
|nearest_unigene=Hs.262857
 
|nearest_unigene=Hs.262857
|num_trans=12
+
|num_trans=158471
 
|species=human
 
|species=human
 
|start=76692143
 
|start=76692143

Latest revision as of 17:56, 19 July 2021

Basic information about the TSS


TSS ID:hg_101050.1
Species:human
Chr:chr9
TSS Classification:yes
Start:76692143
End:76692155
Strand:-
TSS Score:1
Start of the center position in the TSS region:76692149
End of the center position in the TSS region:76692150



Gene and protein annotation


Transcript_name:ENST00000488346.5
Distance:-12
GeneID:158471
HGNC/MGI_ID:HGNC:25209
UniProt_ID:
Gene_name:prune homolog 2 with BCH domain
Gene_symbol:PRUNE2
Gene_synonyms:A214N16.3 BMCC1 BNIPXL bA214N16.3
Gene_source:HGNC:25209



Transcript annotation


Transcript_name:ENST00000488346.5
Distance:-12
Num_trans:158471
All_trans:HGNC:25209



TATA-Box annotation


Distance to TSS:266
Nearest PromoterID:NM_001308049
Entrez ID:158471
Nearest Unigene:Hs.262857
Nearest Refseq:NM_015225
Nearest Ensembl:ENSG00000106772
Gene Name:prune homolog 2 with BCH domain
Gene Alias:BMCC1|BNIPXL|C9orf65|KIAA0367
Gene Description:prune homolog 2 with BCH domain
Gene Type:protein-coding
CpG%:0.015
GC%:0.487562
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):