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Difference between revisions of "TSS:Hg 10118.1"

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Line 31: Line 31:
 
|start_of_center_position=8423773
 
|start_of_center_position=8423773
 
|strand=-
 
|strand=-
|transcript_name=NM_001042682
+
|transcript_name=NM_001042682.2
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_10118.1
 
|tss_id=hg_10118.1

Latest revision as of 17:59, 19 July 2021

Basic information about the TSS


TSS ID:hg_10118.1
Species:human
Chr:chr1
TSS Classification:yes
Start:8423761
End:8423785
Strand:-
TSS Score:1
Start of the center position in the TSS region:8423773
End of the center position in the TSS region:8423774



Gene and protein annotation


Transcript_name:NM_001042682.2
Distance:-47
GeneID:473
HGNC/MGI_ID:HGNC:9965
UniProt_ID:Q9P2R6
Gene_name:arginine-glutamic acid dipeptide repeats
Gene_symbol:RERE
Gene_synonyms:ARG ARP ATN2 DNB1 KIAA0458
Gene_source:HGNC:9965



Transcript annotation


Transcript_name:NM_001042682.2
Distance:-47
Num_trans:6
All_trans:NM_001042682:-47 ENST00000476556.5:96 ENST00000492766.5:96 AF016005:96 ENST00000460659.5:343 ENST00000465125.1:-449



TATA-Box annotation


Distance to TSS:59
Nearest PromoterID:NM_001042682
Entrez ID:473
Nearest Unigene:Hs.463041
Nearest Refseq:NM_012102
Nearest Ensembl:ENSG00000142599
Gene Name:arginine-glutamic acid dipeptide repeats
Gene Alias:ARG|ARP|ATN1L|DNB1|NEDBEH
Gene Description:arginine-glutamic acid dipeptide repeats
Gene Type:protein-coding
CpG%:0.18
GC%:0.855721
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):