Personal tools

Difference between revisions of "TSS:Hg 101681.1"

From referenceTSS

Jump to: navigation, search
 
Line 2: Line 2:
 
|PARIS1=
 
|PARIS1=
 
|TBC1D2A=
 
|TBC1D2A=
|all_trans=ENST00000342112.9:0 AK131290:0 ENST00000375064.5:10 AF318370:10 BC071978:-15 ENST00000375066.6:-18 AY026527:-18 ENST00000465784.7:-34 NR_051978:-34 NM_001267571:-34 NM_018421:-34 AB449882:49 AB209721:69 AK298575:198 CU687204:305 AK026105:379
+
|all_trans=HGNC:18026
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 24: Line 24:
 
|nearest_refseq=NM_018421
 
|nearest_refseq=NM_018421
 
|nearest_unigene=Hs.371016
 
|nearest_unigene=Hs.371016
|num_trans=16
+
|num_trans=55357
 
|species=human
 
|species=human
 
|start=98255589
 
|start=98255589

Latest revision as of 18:10, 19 July 2021

Basic information about the TSS


TSS ID:hg_101681.1
Species:human
Chr:chr9
TSS Classification:yes
Start:98255589
End:98255615
Strand:-
TSS Score:1
Start of the center position in the TSS region:98255602
End of the center position in the TSS region:98255603



Gene and protein annotation


Transcript_name:ENST00000342112.9 AK131290
Distance:0
GeneID:55357
HGNC/MGI_ID:HGNC:18026
UniProt_ID:B3KY99 Q9BYX2
Gene_name:TBC1 domain family member 2
Gene_symbol:TBC1D2
Gene_synonyms:Armus PARIS1 TBC1D2A
Gene_source:HGNC:18026



Transcript annotation


Transcript_name:ENST00000342112.9 AK131290
Distance:0
Num_trans:55357
All_trans:HGNC:18026



TATA-Box annotation


Distance to TSS:47
Nearest PromoterID:NR_051978
Entrez ID:55357
Nearest Unigene:Hs.371016
Nearest Refseq:NM_018421
Nearest Ensembl:ENSG00000095383
Gene Name:TBC1 domain family member 2
Gene Alias:PARIS-1|PARIS1|TBC1D2A
Gene Description:TBC1 domain family member 2
Gene Type:protein-coding
CpG%:0.105
GC%:0.726368
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):