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Difference between revisions of "TSS:Hg 101962.1"

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Line 5: Line 5:
 
|Mrec1.3=
 
|Mrec1.3=
 
|VZG1=
 
|VZG1=
|all_trans=AK299279:-43 ENST00000374431.7:-122 BC036034:-122 ENST00000358883.8:-164 AK022808:-164 NM_001401:-166 NM_057159:-166 NM_001351418:-166 NM_001351417:-166 NM_001351416:-166 NM_001351415:-166 NM_001351419:282
+
|all_trans=HGNC:3166
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.125
 
|cpg_percent=0.125
Line 28: Line 28:
 
|nearest_refseq=NM_001401
 
|nearest_refseq=NM_001401
 
|nearest_unigene=Hs.126667
 
|nearest_unigene=Hs.126667
|num_trans=12
+
|num_trans=1902
 
|rec.1.3=
 
|rec.1.3=
 
|species=human
 
|species=human

Latest revision as of 18:16, 19 July 2021

Basic information about the TSS


TSS ID:hg_101962.1
Species:human
Chr:chr9
TSS Classification:yes
Start:111037910
End:111037921
Strand:-
TSS Score:1
Start of the center position in the TSS region:111037915
End of the center position in the TSS region:111037916



Gene and protein annotation


Transcript_name:AK299279
Distance:-43
GeneID:1902
HGNC/MGI_ID:HGNC:3166
UniProt_ID:
Gene_name:lysophosphatidic acid receptor 1
Gene_symbol:LPAR1
Gene_synonyms:Gpcr26 LPA1 Mrec1.3 edg-2 rec.1.3 vzg-1
Gene_source:HGNC:3166



Transcript annotation


Transcript_name:AK299279
Distance:-43
Num_trans:1902
All_trans:HGNC:3166



TATA-Box annotation


Distance to TSS:171
Nearest PromoterID:NM_057159
Entrez ID:1902
Nearest Unigene:Hs.126667
Nearest Refseq:NM_001401
Nearest Ensembl:ENSG00000198121
Gene Name:lysophosphatidic acid receptor 1
Gene Alias:EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1
Gene Description:lysophosphatidic acid receptor 1
Gene Type:protein-coding
CpG%:0.125
GC%:0.78607
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):